NAME

togff3

USAGE

    Usage: recs togff3 <args> [<files>]
       Each input record is formatted as a GFF3 (General Feature Format version 3)
       line and output to stdout.
    
       The input records should contain the following fields:
    
          seq_id source type start end score strand phase attributes
    
       These are the same fields obtained when using the corresponding
       "fromgff3" command.
    
       Refer to the GFF3 spec for field details:
         https://github.com/The-Sequence-Ontology/Specifications/blob/master/gff3.md
    
    Arguments:
       --filename-key|fk <keyspec>  Add a key with the source filename (if no
                                    filename is applicable will put NONE)
    
      Help Options:
          --help  This help screen
    
    Examples:
       Parse GFF3 and filter to just mRNA features, writing back out GFF3:
          recs fromgff3 hg38.gff | recs grep '{{type}} eq "mRNA"' | recs togff3

SEE ALSO

App::RecordStream::Bio