Name |
Documentation |
Size |
Last Modified |
---|---|---|---|
AhHMA4.acc | 2.78K | Feb 07, 2025 | |
AhHMA4.ali | 202.67K | Feb 07, 2025 | |
AhHMA4.bb | 45 | Feb 07, 2025 | |
AhHMA4.bit | 5.31K | Feb 07, 2025 | |
AhHMA4_5.idl | 231 | Feb 07, 2025 | |
AhHMA4_5.lis | 248 | Feb 07, 2025 | |
AhHMA4_5_col_sep.idl | 237 | Feb 07, 2025 | |
AhHMA4_5_filtered.ali | 3.98K | Feb 07, 2025 | |
AhHMA4_5_reordered.ali | 3.98K | Feb 07, 2025 | |
AhHMA4_clustalw.ali | 4.4K | Feb 07, 2025 | |
AhHMA4_clustalw.fasta | 4.46K | Feb 07, 2025 | |
AhHMA4_clustalw_uni.ali | 4.39K | Feb 07, 2025 | |
AhHMA4_mapper.ali | 11.63K | Feb 07, 2025 | |
AhHMA4_mapper.alt | 427 | Feb 07, 2025 | |
AhHMA4_mapper.idm | 433 | Feb 07, 2025 | |
ali_with_qm.ali | 4.4K | Feb 07, 2025 | |
ali_with_qm_temp.fasta | 3.82K | Feb 07, 2025 | |
ali_with_qm_temp_gaps.fasta | 4.29K | Feb 07, 2025 | |
archaea-mcr-concat-rootA.tre | 20.24K | Feb 07, 2025 | |
archaea-mcr-concat-rootB.tre | 20.24K | Feb 07, 2025 | |
archaea-mcr-concat.tre | 20.24K | Feb 07, 2025 | |
bacteria.cls | 578 | Feb 07, 2025 | |
bacteria.tax | 2.93K | Feb 07, 2025 | |
bacteria.taxids | 174 | Feb 07, 2025 | |
blocks-masked.ali | 325.77K | Feb 07, 2025 | |
blocks.ali | 541.29K | Feb 07, 2025 | |
blocks.blocks | 50 | Feb 07, 2025 | |
bmge.fasta | 290.65K | Feb 07, 2025 | |
bmge_loose.fasta | 28.8K | Feb 07, 2025 | |
bmge_medium.fasta | 18.16K | Feb 07, 2025 | |
bmge_strict.fasta | 16.27K | Feb 07, 2025 | |
cbs.ali | 431 | Feb 07, 2025 | |
cbs.fasta | 266 | Feb 07, 2025 | |
cbs.stockholm | 1.08K | Feb 07, 2025 | |
classifier-simple.idl | 4.8K | Feb 07, 2025 | |
classifier-zero.yaml | 248 | Feb 07, 2025 | |
classifier.yaml | 752 | Feb 07, 2025 | |
collapse.nex | 673 | Feb 07, 2025 | |
collapse.tre | 481 | Feb 07, 2025 | |
colors-itol-euka.txt | 335 | Feb 07, 2025 | |
complete.ali | 631 | Feb 07, 2025 | |
complete.fasta | 627 | Feb 07, 2025 | |
consense.out | 8.42K | Feb 07, 2025 | |
cyano.org-idm | 8.89K | Feb 07, 2025 | |
cyanos.arb | 10.49K | Feb 07, 2025 | |
cyanos_taxa.tre | 11.86K | Feb 07, 2025 | |
empty_seqs.ali | 19 | Feb 07, 2025 | |
euka-adl.cls | 489 | Feb 07, 2025 | |
fake-rootA.tre | 210 | Feb 07, 2025 | |
fake-rootAB.tre | 224 | Feb 07, 2025 | |
fake-rootB.tre | 210 | Feb 07, 2025 | |
fake-rootC.tre | 210 | Feb 07, 2025 | |
fake-rootCD.tre | 218 | Feb 07, 2025 | |
fake-rootD.tre | 210 | Feb 07, 2025 | |
fake-rootE.tre | 210 | Feb 07, 2025 | |
fake-rootEF.tre | 224 | Feb 07, 2025 | |
fake-rootF.tpl | 84 | Feb 07, 2025 | |
fake-rootF.tre | 210 | Feb 07, 2025 | |
fake-unroot.tpl | 82 | Feb 07, 2025 | |
fake-unroot.tre | 154 | Feb 07, 2025 | |
fetch-tax-baseid.idl | 181 | Feb 07, 2025 | |
fetch-tax-baseid.tax | 1.25K | Feb 07, 2025 | |
fetch-tax-gi-acc.idl | 538 | Feb 07, 2025 | |
fetch-tax-gi-acc.tax | 1.12K | Feb 07, 2025 | |
fetch-tax-gi.idl | 74 | Feb 07, 2025 | |
fetch-tax-gi.tax | 687 | Feb 07, 2025 | |
fetch-tax-mustid.idl | 231 | Feb 07, 2025 | |
fetch-tax-mustid.tax | 1.3K | Feb 07, 2025 | |
fetch-tax-name.idl | 205 | Feb 07, 2025 | |
fetch-tax-name.tax | 1.34K | Feb 07, 2025 | |
fetch-tax-taxid.idl | 60 | Feb 07, 2025 | |
fetch-tax-taxid.tax | 1.13K | Feb 07, 2025 | |
filter.fasta | 14.62K | Feb 07, 2025 | |
filter_tax.idm | 602 | Feb 07, 2025 | |
filter_tax_acc.idm | 731 | Feb 07, 2025 | |
filters.idl | 43 | Feb 07, 2025 | |
for-ppred-comp.phy | 15.21K | Feb 07, 2025 | |
for-ppred-prof.phy | 15.4K | Feb 07, 2025 | |
forest | 8.76K | Feb 07, 2025 | |
forest-ids | 17.45K | Feb 07, 2025 | |
forest.idm | 1.28K | Feb 07, 2025 | |
FTSW.tpl | 18.63K | Feb 07, 2025 | |
FTSW.tre | 28.44K | Feb 07, 2025 | |
G12210-O-S-1-NO.data | 2.91K | Feb 07, 2025 | |
G12210-O-S-1-NO.out | 3.71K | Feb 07, 2025 | |
G12210-O-S-1-NO.ref-tre | 756 | Feb 07, 2025 | |
G12210-O-S-1-NO.tre | 756 | Feb 07, 2025 | |
gapify.ali | 234 | Feb 07, 2025 | |
gapify_gap.ali | 234 | Feb 07, 2025 | |
gapify_gap.fasta | 230 | Feb 07, 2025 | |
gapify_X.ali | 234 | Feb 07, 2025 | |
gapify_X.fasta | 230 | Feb 07, 2025 | |
gb_loose.fasta | 7.96K | Feb 07, 2025 | |
gb_medium.fasta | 7.38K | Feb 07, 2025 | |
gb_strict.fasta | 6.32K | Feb 07, 2025 | |
gb_strict.phy_phyml_tree.arb | 508 | Feb 07, 2025 | |
gblocks.fasta | 12.57K | Feb 07, 2025 | |
gblocks_const.ali | 3.82K | Feb 07, 2025 | |
gblocks_gaps.fasta | 12.57K | Feb 07, 2025 | |
gblocks_masked.ali | 12.4K | Feb 07, 2025 | |
get_gtdb_taxonomy_from_gca.test | 86.49K | Feb 07, 2025 | |
get_ncbi_taxonomy_from_gca.test | 10.75K | Feb 07, 2025 | |
get_taxid_from_legacy_seq_id.test | 19.92K | Feb 07, 2025 | |
get_taxid_from_seq_id.test | 20.03K | Feb 07, 2025 | |
gi_mapper.fasta | 52.78K | Feb 07, 2025 | |
gi_mapper.idm | 50.23K | Feb 07, 2025 | |
GNTPAN19392.ali | 2.7K | Feb 07, 2025 | |
GNTPAN19590.ali | 5.52K | Feb 07, 2025 | |
GNTPAN19593.ali | 3.54K | Feb 07, 2025 | |
GNTPAN19618.ali | 3.8K | Feb 07, 2025 | |
GNTPAN19639.ali | 2.98K | Feb 07, 2025 | |
GNTPAN19649.ali | 2.44K | Feb 07, 2025 | |
HMA234-euka-bor.ali | 66.16K | Feb 07, 2025 | |
HMA234-euka.ali | 408.12K | Feb 07, 2025 | |
HMA234-euka.bor | 317 | Feb 07, 2025 | |
HMA234-euka.una | 275 | Feb 07, 2025 | |
insplit.fasta | 6.15K | Feb 07, 2025 | |
leaf_4_fra_bact.list | 2.24K | Feb 07, 2025 | |
lhc-prasino.splits.nex | 108.75K | Feb 07, 2025 | |
life.cls | 92 | Feb 07, 2025 | |
life_html.cls | 109 | Feb 07, 2025 | |
lifemrch.fra | 2.94K | Feb 07, 2025 | |
long-leaf-seqs.idl | 992 | Feb 07, 2025 | |
long-leaf-tree.tre | 11.69K | Feb 07, 2025 | |
map_coords.ali | 717 | Feb 07, 2025 | |
mask.ali | 40 | Feb 07, 2025 | |
misleading.idl | 156.25K | Feb 07, 2025 | |
missify-miss.ali | 318 | Feb 07, 2025 | |
missify.ali | 318 | Feb 07, 2025 | |
missify_ref.ali | 318 | Feb 07, 2025 | |
mullidae-unrooted.tpl | 4.09K | Feb 07, 2025 | |
mullidae-unrooted.tre | 6.35K | Feb 07, 2025 | |
mullidae-well-rooted.tre | 6.34K | Feb 07, 2025 | |
neglist-out.ali | 198.76K | Feb 07, 2025 | |
neglist.ali | 202.67K | Feb 07, 2025 | |
neglist.idl | 231 | Feb 07, 2025 | |
new_seqs.ali | 128 | Feb 07, 2025 | |
nuclideal.ali | 237 | Feb 07, 2025 | |
nuclideal_0.5.ali | 119 | Feb 07, 2025 | |
nuclideal_0.25.ali | 129 | Feb 07, 2025 | |
nuclideal_1.ali | 129 | Feb 07, 2025 | |
nuclideal_2.ali | 119 | Feb 07, 2025 | |
obs-ppred-freqs-glb.tsv | 244.82K | Feb 07, 2025 | |
obs-ppred-freqs-reorder.tsv | 97.93K | Feb 07, 2025 | |
obs-ppred-freqs.tsv | 97.93K | Feb 07, 2025 | |
obs.idl | 11 | Feb 07, 2025 | |
OG0000464-edit-MMETSP172-clade.txt | 29.25K | Feb 07, 2025 | |
OG0000464-edit-MMETSP172-collapse.txt | 3.65K | Feb 07, 2025 | |
OG0000464-edit-MMETSP172-color.txt | 29.25K | Feb 07, 2025 | |
OG0000464-edit-MMETSP172-label.txt | 13.17K | Feb 07, 2025 | |
OG0000464-edit-MMETSP172-range.txt | 29.25K | Feb 07, 2025 | |
OG0000464-edit-MMETSP172.idm | 103K | Feb 07, 2025 | |
OG0000464-edit-MMETSP172.tre | 15.02K | Feb 07, 2025 | |
OG0001014.fasta | 2.34K | Feb 07, 2025 | |
outsplit.fasta | 6.28K | Feb 07, 2025 | |
P-rpoB-CYANO10254.idm | 6.52K | Feb 07, 2025 | |
parsimony.msk | 51.24K | Feb 07, 2025 | |
PBP3-clade.txt | 36.2K | Feb 07, 2025 | |
PBP3-collapse.txt | 6K | Feb 07, 2025 | |
PBP3-color.txt | 36.2K | Feb 07, 2025 | |
PBP3-label.txt | 47.1K | Feb 07, 2025 | |
PBP3-range.txt | 36.2K | Feb 07, 2025 | |
PBP3.arb | 30.6K | Feb 07, 2025 | |
PBP3.idl | 20.33K | Feb 07, 2025 | |
PBP3.tre | 31.62K | Feb 07, 2025 | |
PBP3_auto.tre | 37.56K | Feb 07, 2025 | |
PBP3_auto_phylum.nex | 50.09K | Feb 07, 2025 | |
PBP3_family.tre | 37.23K | Feb 07, 2025 | |
PBP3_family_phylum.nex | 49.76K | Feb 07, 2025 | |
PBP3_phylum_4color.nex | 69.8K | Feb 07, 2025 | |
phylip-lr.phy | 7.74K | Feb 07, 2025 | |
phylip-rep.phy | 8.92K | Feb 07, 2025 | |
phylip.ali | 7.16K | Feb 07, 2025 | |
phylip.fasta | 7.14K | Feb 07, 2025 | |
phylip.p80 | 7.05K | Feb 07, 2025 | |
phylip.phy | 8.92K | Feb 07, 2025 | |
plantae.arb | 4.08K | Feb 07, 2025 | |
plantae_ali.arb | 4.1K | Feb 07, 2025 | |
ppred-1.phy | 15.51K | Feb 07, 2025 | |
ppred-2.phy | 15.51K | Feb 07, 2025 | |
ppred-3.phy | 15.51K | Feb 07, 2025 | |
ppred-4.phy | 15.51K | Feb 07, 2025 | |
ppred-5.phy | 15.51K | Feb 07, 2025 | |
ppred-6.phy | 15.51K | Feb 07, 2025 | |
ppred-7.phy | 15.51K | Feb 07, 2025 | |
ppred-8.phy | 15.51K | Feb 07, 2025 | |
ppred-9.phy | 15.51K | Feb 07, 2025 | |
ppred-10.phy | 15.51K | Feb 07, 2025 | |
ppred-11.phy | 15.51K | Feb 07, 2025 | |
ppred-12.phy | 15.51K | Feb 07, 2025 | |
ppred-13.phy | 15.51K | Feb 07, 2025 | |
ppred-14.phy | 15.51K | Feb 07, 2025 | |
ppred-15.phy | 15.51K | Feb 07, 2025 | |
ppred-16.phy | 15.51K | Feb 07, 2025 | |
ppred-17.phy | 15.51K | Feb 07, 2025 | |
ppred-18.phy | 15.51K | Feb 07, 2025 | |
ppred-19.phy | 15.51K | Feb 07, 2025 | |
ppred-20.phy | 15.51K | Feb 07, 2025 | |
ppred-21.phy | 15.51K | Feb 07, 2025 | |
ppred-22.phy | 15.51K | Feb 07, 2025 | |
ppred-23.phy | 15.51K | Feb 07, 2025 | |
ppred-24.phy | 15.51K | Feb 07, 2025 | |
ppred-25.phy | 15.51K | Feb 07, 2025 | |
ppred-26.phy | 15.51K | Feb 07, 2025 | |
ppred-27.phy | 15.51K | Feb 07, 2025 | |
ppred-28.phy | 15.51K | Feb 07, 2025 | |
ppred-29.phy | 15.51K | Feb 07, 2025 | |
ppred-30.phy | 15.51K | Feb 07, 2025 | |
ppred-31.phy | 15.51K | Feb 07, 2025 | |
ppred-32.phy | 15.51K | Feb 07, 2025 | |
ppred-33.phy | 15.51K | Feb 07, 2025 | |
ppred-34.phy | 15.51K | Feb 07, 2025 | |
ppred-35.phy | 15.51K | Feb 07, 2025 | |
ppred-36.phy | 15.51K | Feb 07, 2025 | |
ppred-37.phy | 15.51K | Feb 07, 2025 | |
ppred-38.phy | 15.51K | Feb 07, 2025 | |
ppred-39.phy | 15.51K | Feb 07, 2025 | |
ppred-40.phy | 15.51K | Feb 07, 2025 | |
ppred-41.phy | 15.51K | Feb 07, 2025 | |
ppred-42.phy | 15.51K | Feb 07, 2025 | |
ppred-43.phy | 15.51K | Feb 07, 2025 | |
ppred-44.phy | 15.51K | Feb 07, 2025 | |
ppred-45.phy | 15.51K | Feb 07, 2025 | |
ppred-46.phy | 15.51K | Feb 07, 2025 | |
ppred-47.phy | 15.51K | Feb 07, 2025 | |
ppred-48.phy | 15.51K | Feb 07, 2025 | |
ppred-49.phy | 15.51K | Feb 07, 2025 | |
ppred-50.phy | 15.51K | Feb 07, 2025 | |
ppred-freqs-by-seq.tsv | 5.64M | Feb 07, 2025 | |
primate.fas | 10.76K | Feb 07, 2025 | |
primate.nex | 21.87K | Feb 07, 2025 | |
primate.rates | 9.05K | Feb 07, 2025 | |
protideal.ali | 237 | Feb 07, 2025 | |
protideal_0.5.ali | 219 | Feb 07, 2025 | |
protideal_0.25.ali | 229 | Feb 07, 2025 | |
protideal_1.ali | 229 | Feb 07, 2025 | |
protideal_2.ali | 219 | Feb 07, 2025 | |
recode_seqs.ali | 948 | Feb 07, 2025 | |
rg-supermatrix-IQTREE.rate | 21.87K | Feb 07, 2025 | |
root_tree_names_rooted_ladder.tre | 4.53K | Feb 07, 2025 | |
root_tree_names_rooted_ladder_hand.tre | 4.52K | Feb 07, 2025 | |
root_tree_names_unrooted.tre | 6.49K | Feb 07, 2025 | |
rooted-bp.grp | 31 | Feb 07, 2025 | |
rooted-bp.nbs | 509 | Feb 07, 2025 | |
rooted-bp.tre | 129 | Feb 07, 2025 | |
rooted-pp.grp | 31 | Feb 07, 2025 | |
rooted-pp.nbs | 509 | Feb 07, 2025 | |
rooted-pp.tre | 133 | Feb 07, 2025 | |
secure.ali | 0 | Feb 07, 2025 | |
selection.idl | 893 | Feb 07, 2025 | |
selection.tax | 7.37K | Feb 07, 2025 | |
seqid-grp-nbs.grp | 5.5K | Feb 07, 2025 | |
seqid-grp-nbs.tre | 6.24K | Feb 07, 2025 | |
seqs4uc.ali | 948 | Feb 07, 2025 | |
shortlist.clo.idm | 25.47K | Feb 07, 2025 | |
shortlist.clo.phy_phyml_tree.txt | 26.69K | Feb 07, 2025 | |
shortlist.clo.tre | 39.87K | Feb 07, 2025 | |
sim.idl | 11 | Feb 07, 2025 | |
simple.tre | 105 | Feb 07, 2025 | |
sparse_seqs.ali | 254.98K | Feb 07, 2025 | |
sparse_seqs.fasta | 388.01K | Feb 07, 2025 | |
sparse_seqs_pad.ali | 381.67K | Feb 07, 2025 | |
sparse_seqs_pad.fasta | 388.01K | Feb 07, 2025 | |
speclist.idm | 1.15K | Feb 07, 2025 | |
stash.fasta | 966 | Feb 07, 2025 | |
store-una-blocks-align.blocks | 34 | Feb 07, 2025 | |
store-una-ex-seq.ali | 150 | Feb 07, 2025 | |
store-una.una | 118 | Feb 07, 2025 | |
store_blocks.blocks | 59 | Feb 07, 2025 | |
superideal.ali | 403.25K | Feb 07, 2025 | |
superideal_0.1.ali | 403.24K | Feb 07, 2025 | |
superideal_0.3.ali | 399.23K | Feb 07, 2025 | |
superideal_0.5.ali | 341.11K | Feb 07, 2025 | |
superideal_0.7.ali | 277.15K | Feb 07, 2025 | |
superideal_0.9.ali | 74.48K | Feb 07, 2025 | |
supermatrix-a2p.ali | 134.42K | Feb 07, 2025 | |
supermatrix-bin0.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin1.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin2.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin3.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin4.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin5.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin6.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin7.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin8.ali | 13.73K | Feb 07, 2025 | |
supermatrix-bin9.ali | 13.71K | Feb 07, 2025 | |
supermatrix-CATG-A-sample.rate | 370.88K | Feb 07, 2025 | |
supermatrix-CATG-B-sample.rate | 370.8K | Feb 07, 2025 | |
supermatrix-noconstant.msk | 51.24K | Feb 07, 2025 | |
supermatrix-noconstant.phy | 147.63K | Feb 07, 2025 | |
supermatrix.ali | 205.24K | Feb 07, 2025 | |
supermatrix.phy | 263.51K | Feb 07, 2025 | |
tab_mapper_gi2taxid.idm | 2.86M | Feb 07, 2025 | |
tab_mapper_mustids.idm | 12.11K | Feb 07, 2025 | |
tab_mapper_mustids.tsv | 14.95K | Feb 07, 2025 | |
tab_mapper_with_idm.idm | 8.98K | Feb 07, 2025 | |
tab_mapper_with_idm.tsv | 11.83K | Feb 07, 2025 | |
tax-fake-rootA.tre | 210 | Feb 07, 2025 | |
tax-fake-rootAB.tre | 224 | Feb 07, 2025 | |
tax-fake-rootB.tre | 210 | Feb 07, 2025 | |
tax-fake-rootC.tre | 210 | Feb 07, 2025 | |
tax-fake-rootCD.tre | 218 | Feb 07, 2025 | |
tax-fake-rootD.tre | 210 | Feb 07, 2025 | |
tax-fake-rootE.tre | 210 | Feb 07, 2025 | |
tax-fake-rootEF.tre | 224 | Feb 07, 2025 | |
tax-fake-rootF.tre | 210 | Feb 07, 2025 | |
taxmask.ali | 311 | Feb 07, 2025 | |
taxmask.yaml | 235 | Feb 07, 2025 | |
taxmask_metazoans.fasta | 124 | Feb 07, 2025 | |
taxmask_opisthokonts.fasta | 284 | Feb 07, 2025 | |
temp.fasta | 4.28K | Feb 07, 2025 | |
temp_degap.fasta | 3.82K | Feb 07, 2025 | |
temp_degap_nowrap.fasta | 3.76K | Feb 07, 2025 | |
temp_prefix.fasta | 4.29K | Feb 07, 2025 | |
test-delta.rates | 172.85K | Feb 07, 2025 | |
test-othr.meansiterates | 293.58K | Feb 07, 2025 | |
test-pmsf-archaea.sitefreq | 10.83M | Feb 07, 2025 | |
test-pmsf-chi-square.stats | 537.25K | Feb 07, 2025 | |
test-pmsf-euka.sitefreq | 10.83M | Feb 07, 2025 | |
test-pmsf.ali | 4.36M | Feb 07, 2025 | |
test-self.meansiterates | 293.56K | Feb 07, 2025 | |
test_recode_expected.ali | 948 | Feb 07, 2025 | |
test_uc_expected.ali | 948 | Feb 07, 2025 | |
thermus.fas | 6.41K | Feb 07, 2025 | |
thermus.nex | 18.7K | Feb 07, 2025 | |
thermus.rates | 9.65K | Feb 07, 2025 | |
tinyseq.xml | 7.71K | Feb 07, 2025 | |
tinyseq_ks0.ali | 6.07K | Feb 07, 2025 | |
tinyseq_ks1.ali | 6.08K | Feb 07, 2025 | |
tricky.names | 2.72K | Feb 07, 2025 | |
tricky.tax | 21.4K | Feb 07, 2025 | |
uc_seqs.ali | 948 | Feb 07, 2025 | |
unaligned.ali | 89 | Feb 07, 2025 | |
underscores.idm | 157 | Feb 07, 2025 | |
uniq.ali | 239 | Feb 07, 2025 | |
unrooted-bp.grp | 20 | Feb 07, 2025 | |
unrooted-bp.nbs | 511 | Feb 07, 2025 | |
unrooted-bp.tre | 122 | Feb 07, 2025 | |
unrooted-pp.grp | 20 | Feb 07, 2025 | |
unrooted-pp.nbs | 511 | Feb 07, 2025 | |
unrooted-pp.tre | 126 | Feb 07, 2025 | |
upsk.ali | 516 | Feb 07, 2025 | |
upsk.stockholm | 673 | Feb 07, 2025 |