++ed by:
THALJEF CJFIELDS MAJENSEN FIBO GENEHACK

5 PAUSE user(s)
6 non-PAUSE user(s).

Christopher Fields
and 1 contributors

NAME

Bio::LiveSeq::Prim_Transcript - Prim_Transcript class for LiveSeq

SYNOPSIS

  # documentation needed

DESCRIPTION

Class for PRIM_TRANSCRIPT objects. They consist of a beginlabel, an endlabel (both referring to a LiveSeq DNA object) and a strand. The strand could be 1 (forward strand, default), -1 (reverse strand).

AUTHOR - Joseph A.L. Insana

Email: Insana@ebi.ac.uk, jinsana@gmx.net

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new

  Title   : new
  Usage   : $intron1=Bio::LiveSeq::Prim_Transcript->new(-seq => $objref,
                                                        -start => $startlabel,
                                                        -end => $endlabel, 
                                                        -strand => 1
                                                        );

  Function: generates a new Bio::LiveSeq::Prim_Transcript
  Returns : reference to a new object of class Prim_Transcript
  Errorcode -1
  Args    : two labels and an integer