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all_entities_SSCell

Return all instances of the SSCell entity.

An SSCell (SpreadSheet Cell) represents a role as it occurs in a subsystem spreadsheet row. The key is a colon-delimited triple containing an MD5 hash of the subsystem ID followed by a genome ID (with optional region string) and a role abbreviation.

Example:

    all_entities_SSCell -a 

would retrieve all entities of type SSCell and include all fields in the entities in the output.

The SSCell entity has the following relationship links:

Contains Feature
HasRole Role
IsRoleFor SSRow

Command-Line Options

-a

Return all fields.

-h

Display a list of the fields available for use.

-fields field-list

Choose a set of fields to return. Field-list is a comma-separated list of strings. The following fields are available:

Output Format

The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.