A complex can be triggered by many roles. A role can trigger many complexes.
Example:
get_relationship_Triggers -a < ids > table.with.fields.added
would read in a file of ids and add a column for each field in the relationship.
The standard input should be a tab-separated table (i.e., each line is a tab-separated set of fields). Normally, the last field in each line would contain the id. If some other column contains the id, use
-c N
where N is the column (from 1) that contains the id.
This is a pipe command. The input is taken from the standard input, and the output is to the standard output.
This is used only if the column containing id is not the last.
Choose a set of fields from the Complex entity to return. Field-list is a comma-separated list of strings. The following fields are available:
Choose a set of fields from the relationship to return. Field-list is a comma-separated list of strings. The following fields are available:
Choose a set of fields from the Role entity to return. Field-list is a comma-separated list of strings. The following fields are available:
The standard output is a tab-delimited file. It consists of the input file with an extra column added for each requested field. Input lines that cannot be extended are written to stderr.
To install Bio::KBase, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::KBase
CPAN shell
perl -MCPAN -e shell install Bio::KBase
For more information on module installation, please visit the detailed CPAN module installation guide.