Bio::PanGenome::CombinedProteome - Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's
version 1.133090
Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's use Bio::PanGenome::CombinedProteome;
my $obj = Bio::PanGenome::CombinedProteome->new( proteome_files => ['abc.fa','efg.fa'], output_filename => 'example_output.fa', maximum_percentage_of_unknowns => 5.0, ); $obj->create_combined_proteome_file;
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::PanGenome, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::PanGenome
CPAN shell
perl -MCPAN -e shell install Bio::PanGenome
For more information on module installation, please visit the detailed CPAN module installation guide.