Bio::Roary::External::Revtrans - Wrapper around RevTrans
version 2.0.0
Take in a fasta file and create a temporary blast database.
use Bio::Roary::External::Revtrans; my $blast_database= Bio::Roary::External::Revtrans->new( nucleotide_filename => 'contigs.fa', protein_filename => 'proteins.faa' output_filename => 'translated.fa.aln' ); $blast_database->run();
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::Roary, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Roary
CPAN shell
perl -MCPAN -e shell install Bio::Roary
For more information on module installation, please visit the detailed CPAN module installation guide.