Bio::AssemblyImprovement::Scaffold::Descaffold - Given a fasta file as input, output a descaffolded multi-fasta file.
version 1.160490
Given a fasta file as input, output a descaffolded multi-fasta file.
use Bio::AssemblyImprovement::Scaffold::Descaffold; my $descaffold_obj = Bio::AssemblyImprovement::Scaffold::Descaffold->new( input_assembly => 'contigs.fa' ); $descaffold_obj->run();
Descaffold a FASTA file.
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2012 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::AssemblyImprovement, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::AssemblyImprovement
CPAN shell
perl -MCPAN -e shell install Bio::AssemblyImprovement
For more information on module installation, please visit the detailed CPAN module installation guide.