Ewan Birney

NAME

Bio::Biblio::IO::pubmedxml - A converter of XML files with PUBMED citations

SYNOPSIS

Do not use this object directly, it is recommended to access it and use it through the Bio::Biblio::IO module:

  use Bio::Biblio:IO;
  my $io = new Bio::Biblio::IO (-format => 'pubmedxml');

DESCRIPTION

This object reads bibliographic citations in XML/MEDLINE format and converts them into Bio::Biblio::RefI objects. It is an implementation of methods defined in Bio::Biblio::IO.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org              - General discussion
  http://bioperl.org/MailList.shtml  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:

  bioperl-bugs@bioperl.org
  http://bioperl.org/bioperl-bugs/

AUTHOR

Martin Senger (senger@ebi.ac.uk)

COPYRIGHT

Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved.

This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

DISCLAIMER

This software is provided "as is" without warranty of any kind.

APPENDIX

The main documentation details are to be found in Bio::Biblio::IO.

Here is the rest of the object methods. Internal methods are preceded with an underscore _.

VERSION and Revision

 Usage   : print $Bio::Biblio::IO::pubmedxml::VERSION;
           print $Bio::Biblio::IO::pubmedxml::Revision;