Ewan Birney

NAME

Bio::Biblio::PubmedJournalArticle - Representation of a PUBMED journal article

SYNOPSIS

    $obj = new Bio::Biblio::PubmedJournalArticle (

                  # some attributes from MedlineJournalArticle
                  -title => 'Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.',
                  -journal => new Bio::Biblio::MedlineJournal (-issn => '0027-8424'),
                  -volume => 96,
                  -issue => 7,

                  # and some from PubmedArticle
                  -pubmed_history_list =>
                       [ { 'pub_status' => 'pubmed',
                           'date' => '2001-12-1T10:0:00Z' },
                         { 'pub_status' => 'medline',
                           'date' => '2002-1-5T10:1:00Z' } ],
                   -pubmed_status => 'ppublish');
 --- OR ---

    $obj = new Bio::Biblio::PubmedJournalArticle;
    $obj->title ('...');
    $obj->journal (new Bio::Biblio::MedlineJournal (-issn => '0027-8424'));
    $obj->pubmed_status ('ppublish');

DESCRIPTION

A storage object for a PUBMED journal article. See its place in the class hierarchy in http://industry.ebi.ac.uk/openBQS/images/bibobjects_perl.gif

Attributes

There are no specific attributes in this class (however, you can set and get all attributes defined in the parent classes).

SEE ALSO

  • OpenBQS home page: http://industry.ebi.ac.uk/openBQS

  • Comments to the Perl client: http://industry.ebi.ac.uk/openBQS/Client_perl.html

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org              - General discussion
  http://bioperl.org/MailList.shtml  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:

  bioperl-bugs@bioperl.org
  http://bioperl.org/bioperl-bugs/

AUTHOR

Martin Senger (senger@ebi.ac.uk)

COPYRIGHT

Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved.

This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

DISCLAIMER

This software is provided "as is" without warranty of any kind.