- AUTHOR - Joseph A.L. Insana
Bio::LiveSeq::ChainI - Double linked chain data structure
This class generates and manipulates generic double linked list, chain, that can be used to manage biological sequences.
The advantages over strings or plain arrays is the ease of tracking changes (mutations) in the elements (sequence). The other side of the coin is that these structures need consideraly more memory, but that is cheap and constantly inceasing resource in computers.
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Email: Insana@ebi.ac.uk, email@example.com Address:
EMBL Outstation, European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton Cambs. CB10 1SD, United Kingdom
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : $chain = Bio::LiveSeq::ChainI->new(-string => "thequickbrownfoxjumpsoverthelazydog", -offset => 3 ); OR $chain = Bio::LiveSeq::ChainI->new(-array => \@array, -offset => 3 ); Function: generates a new Bio::LiveSeq:ChainI Returns : a new Chain Args : string OR arrayreference AND optional offset to create element labels