Ewan Birney

NAME

Bio::Search::GenericDatabase - Generic implementation of Bio::Search::DatabaseI

SYNOPSIS

    use Bio::Search::GenericDatabase;

    $db = Bio::Search::GenericDatabase->new( -name => 'my Blast db',
                                             -date => '2001-03-13',
                                             -length => 2352511,
                                             -entries => 250000 );

    $name = $db->name();
    $date = $db->date();
    $num_letters = $db->letters();
    $num_entries = $db->entries();

DESCRIPTION

This module provides a basic implementation of Bio::Search::DatabaseI. See documentation in that module for more information.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.

    bioperl-l@bioperl.org                - General discussion
    http://bio.perl.org/MailList.html    - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via email or the web:

    bioperl-bugs@bio.perl.org                   
    http://bio.perl.org/bioperl-bugs/           

AUTHOR

Steve Chervitz <sac@bioperl.org>

See the FEEDBACK section for where to send bug reports and comments.

COPYRIGHT

Copyright (c) 2001 Steve Chervitz. All Rights Reserved.

DISCLAIMER

This software is provided "as is" without warranty of any kind.

APPENDIX

The rest of the documentation details each of the object methods.

name

See Bio::Search::DatabaseI::name() for documentation

This implementation is a combined set/get accessor.

date

See Bio::Search::DatabaseI::date() for documentation

This implementation is a combined set/get accessor.

letters

See Bio::Search::DatabaseI::letters() for documentation

This implementation is a combined set/get accessor.

entries

See Bio::Search::DatabaseI::entries() for documentation

This implementation is a combined set/get accessor.