Ewan Birney

NAME

Bio::SeqIO::MultiFile - Treating a set of files as a single input stream

SYNOPSIS

   $seqin = Bio::SeqIO::MultiFile( '-format' => 'Fasta',
                                   '-files'  => ['file1','file2'] );
   while((my $seq = $seqin->next_seq)) {
       # do something with $seq
   }

DESCRIPTION

Bio::SeqIO::MultiFile provides a simple way of bundling a whole set of identically formatted sequence input files as a single stream.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.

  bioperl-l@bioperl.org                 - General discussion
  http://www.bioperl.org/MailList.shtml - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via email or the web:

  bioperl-bugs@bio.perl.org
  http://bio.perl.org/bioperl-bugs/

AUTHOR - Ewan Birney

Email birney@ebi.ac.uk

Describe contact details here

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

next_seq

 Title   : next_seq
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

next_primary_seq

 Title   : next_primary_seq
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

_load_file

 Title   : _load_file
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

_set_file

 Title   : _set_file
 Usage   :
 Function:
 Example :
 Returns : 
 Args    :

_current_seqio

 Title   : _current_seqio
 Usage   : $obj->_current_seqio($newval)
 Function: 
 Example : 
 Returns : value of _current_seqio
 Args    : newvalue (optional)

_format

 Title   : _format
 Usage   : $obj->_format($newval)
 Function: 
 Example : 
 Returns : value of _format
 Args    : newvalue (optional)