Bio::LiveSeq::Range - Range abstract class for LiveSeq
# documentation needed
This is used as parent for exon and intron classes.
Email: Insana@ebi.ac.uk, jinsana@gmx.net
Address:
EMBL Outstation, European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton Cambs. CB10 1SD, United Kingdom
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : $range1 = Bio::LiveSeq::Range->new(-seq => $obj_ref, -start => $beginlabel, -end => $endlabel, -strand => 1); Function: generates a new Bio::LiveSeq::Range Returns : reference to a new object of class Range Errorcode -1 Args : two labels, an obj_ref and an integer strand 1=forward strand, strand -1=reverse strand if strand not specified, it defaults to 1 the -seq argument must point to the underlying DNA LiveSeq object
Title : valid Usage : $boolean = $obj->valid($label) Function: tests if a label exists AND is part of the object Returns : boolean Args : label
To install Bio::Seq, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Seq
CPAN shell
perl -MCPAN -e shell install Bio::Seq
For more information on module installation, please visit the detailed CPAN module installation guide.