NAME

Bio::Tradis::DetectTags - Detect tr tags in BAM file

VERSION

version 1.132190

SYNOPSIS

Detects presence of tr/tq tags in BAM files from Tradis analyses use Bio::Tradis::DetectTags;

   my $pipeline = Bio::Tradis::DetectTags->new(bamfile => 'abc');
   $pipeline->tags_present();

NAME

Bio::Tradis::DetectTags

PARAMETERS

Required

bamfile - path to/name of file to check

METHODS

tags_present - returns true if TraDIS tags are detected in bamfile

AUTHOR

Carla Cummins <cc21@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007