bp_seqconvert - generic BioPerl sequence format converter
bp_seqconvert --from in-format --to out-format < file.in-format > file.out-format # or bp_seqconvert -f in-format -t out-format < file.in-format > file.out-format
This script gives command line interface to BioPerl Bio::SeqIO.
Bio::SeqIO bp_sreformat.PLS for similar functionality which also supports AlignIO.
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Email <p.lijnzaad-at-med.uu.nl>
To install BioPerl, copy and paste the appropriate command in to your terminal.
cpanm
cpanm BioPerl
CPAN shell
perl -MCPAN -e shell install BioPerl
For more information on module installation, please visit the detailed CPAN module installation guide.