++ed by:
GENEHACK PINGAN POTATOGIM MAJENSEN THALJEF

11 PAUSE users
14 non-PAUSE users.

Christopher Fields
and 1 contributors

NAME

Bio::Search::HSP::HSPFactory - A factory to create Bio::Search::HSP::HSPI objects

SYNOPSIS

    use Bio::Search::HSP::HSPFactory;
    my $factory = Bio::Search::HSP::HSPFactory->new();
    my $resultobj = $factory->create(@args);

DESCRIPTION

This is a general way of hiding the object creation process so that we can dynamically change the objects that are created by the SearchIO parser depending on what format report we are parsing.

This object is for creating new HSPs.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

  http://bugzilla.open-bio.org/

AUTHOR - Jason Stajich

Email jason-at-bioperl.org

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new

 Title   : new
 Usage   : my $obj = Bio::Search::HSP::HSPFactory->new();
 Function: Builds a new Bio::Search::HSP::HSPFactory object 
 Returns : Bio::Search::HSP::HSPFactory
 Args    :

create

 Title   : create
 Usage   : $factory->create(%args)
 Function: Create a new L<Bio::Search::HSP::HSPI> object  
 Returns : L<Bio::Search::HSP::HSPI>
 Args    : hash of initialization parameters

type

 Title   : type
 Usage   : $factory->type('Bio::Search::HSP::GenericHSP');
 Function: Get/Set the HSP creation type
 Returns : string
 Args    : [optional] string to set