++ed by:
DEMIAN POTATOGIM THALJEF MAJENSEN ILUX

11 PAUSE users
14 non-PAUSE users.

Christopher Fields
and 1 contributors

NAME

Bio::SeqIO::tigrxml - Parse TIGR (new) XML

SYNOPSIS

  use Bio::SeqIO;
  my $in = Bio::SeqIO->new(-format => 'tigrcoordset',
                          -file   => 'file.xml');

  while( my $seq = $in->next_seq ) {
     # do something...
  }

DESCRIPTION

This is a parser for TIGR Coordset XML for their in-progress annotation dbs.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

  http://bugzilla.bioperl.org

AUTHOR - Jason Stajich

Email jason-at-bioperl-dot-org

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _