AIIA::GMT - a XML-RPC client of a web-service server, AIIA gene mention tagger, which provides the service to recognize named entities in the biomedical articles
use YAML; use AIIA::GMT; $result = &text2entity('less than 3000 words'); print Dump $result;
AIIA::GMT is a XML-RPC client of a web-service server, AIIA gene mention tagger, which provides the service to recognize named entities in the biomedical articles.
AIIA gene mention tagger, developed by Adaptive Internet Intelligent Agents Lab, Institute of Information Science, Academia Sinica, Taiwan and I-Fang Chung's Lab, Institute of Bioinformatics, National Yang-Ming University, Taiwan, is a named entity recognition tool which participated in the BioCreative II challenge evaluation and attained a 0.8683 of F-score (ranked 2nd) in the final system assessment of the Gene Mention task.
This module is developed to help those who want to use this remote service with XML-RPC, rather than with its web interface. Finally, this module and service is released under a GPLv3 License. You're free to use it for both academic or personal use.
Return a ARRAY reference which contains all of the entities recognized from your input with its position information, for example: '20 seperated-by-tab human protein-tyrosine-phosphatase'.
Frontier::Client
Hopefully none.
http://aiia.iis.sinca.edu.tw/biocreative2.htm
Cheng-Ju Kuo cju.kuo@gmail.com
Copyright (c) 2008 by Cheng-Ju Kuo and the Institute of Information Science, Academia Sinica, Taipei, Taiwan.
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.8 or, at your option, any later version of Perl 5 you may have available.
1 POD Error
The following errors were encountered while parsing the POD:
'=item' outside of any '=over'
To install AIIA::GMT, copy and paste the appropriate command in to your terminal.
cpanm
cpanm AIIA::GMT
CPAN shell
perl -MCPAN -e shell install AIIA::GMT
For more information on module installation, please visit the detailed CPAN module installation guide.