tab2mapper.pl - Build an id mapper from a tabular file giving annotation strings.
version 0.191300
tab2mapper.pl <infiles> [optional arguments]
Path to input tabular (TSV) files [repeatable argument].
Column number providing the string to be used as the family [default: 1]. The first column (at index 0) is the id and thus cannot be used as the family.
Optional GI-to-taxid IDM to be used to expand GIs to modern MUST ids [default: none]. This option requires a local mirror of the NCBI Taxonomy database.
Path to local mirror of the NCBI Taxonomy database.
Print the usual program information
Denis BAURAIN <denis.baurain@uliege.be>
Loic MEUNIER <loic.meunier@doct.uliege.be>
This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.
This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.
To install Bio::MUST::Core, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::MUST::Core
CPAN shell
perl -MCPAN -e shell install Bio::MUST::Core
For more information on module installation, please visit the detailed CPAN module installation guide.