extract-ali.pl - Extract sequences from a FASTA database file based on id lists
version 0.210610
extract-ali.pl <infiles> --database=<file> [optional arguments]
Path to input IDL files [repeatable argument].
Path to the FASTA file containing the sequence database.
Truncate database ids on first whitespace before extraction [default: no].
Reorder sequences following list [default: no].
Print the usual program information
Denis BAURAIN <denis.baurain@uliege.be>
This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.
This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.
To install Bio::MUST::Core, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::MUST::Core
CPAN shell
perl -MCPAN -e shell install Bio::MUST::Core
For more information on module installation, please visit the detailed CPAN module installation guide.