inst-qual-filter.pl <infiles> --out=<suffix> [optional arguments]
Path to input FASTA files [repeatable argument].
Suffix to append to infile basenames for deriving outfile names.
Path to FASTA outfile collecting unpure sequences that have been filtered out [default: none].
Fraction (between 0 and 1) of pure DNA character states (ACGT) required by a sequence for it to be retained [default: 1]. All other states (including ambiguous, missing and gap-like character states) are considered as non-pure.
Print the usual program information
To install Bio::MUST::Core, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::MUST::Core
CPAN shell
perl -MCPAN -e shell install Bio::MUST::Core
For more information on module installation, please visit the detailed CPAN module installation guide.