FAST::Bio::Seq::SeqFastaSpeedFactory - Instantiates a new FAST::Bio::PrimarySeqI (or derived class) through a factory
use FAST::Bio::Seq::SeqFastaSpeedFactory; my $factory = FAST::Bio::Seq::SeqFastaSpeedFactory->new(); my $seq = $factory->create(-seq => 'WYRAVLC', -id => 'name'); # If you want the factory to create FAST::Bio::Seq objects instead # of the default FAST::Bio::PrimarySeq objects, use the -type parameter: my $factory = FAST::Bio::Seq::SeqFastaSpeedFactory->new(-type => 'FAST::Bio::Seq');
This object will build FAST::Bio::Seq objects generically.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : my $obj = FAST::Bio::Seq::SeqFastaSpeedFactory->new(); Function: Builds a new FAST::Bio::Seq::SeqFastaSpeedFactory object Returns : FAST::Bio::Seq::SeqFastaSpeedFactory Args : -type => string, name of a PrimarySeqI derived class This is optional. Default=FAST::Bio::PrimarySeq.
Title : create Usage : my $seq = $seqbuilder->create(-seq => 'CAGT', -id => 'name'); Function: Instantiates a new FAST::Bio::Seq object, correctly built but very fast, knowing stuff about FAST::Bio::PrimarySeq and FAST::Bio::Seq Returns : FAST::Bio::Seq Args : initialization parameters specific to the type of sequence object we want. Typically -seq => $str, -id => $name
To install FAST, copy and paste the appropriate command in to your terminal.
cpanm
cpanm FAST
CPAN shell
perl -MCPAN -e shell install FAST
For more information on module installation, please visit the detailed CPAN module installation guide.