get_lowest_common_ancestor.pl - Get the lowest common ancestor (LCA) of two terms in a given OBO ontology.
Gets the lowest common ancestor (LCA) of two terms in a given OBO-formatted ontology. This script is generally used with taxonomies (e.g. NCBI taxonomy). This version only gets the LCA computed through the 'is_a' relationship type. Also, it assumes that there is only one root term in the ontology.
Erick Antezana, <erick.antezana -@- gmail.com>
Copyright (c) 2006-2015 by Erick Antezana. All rights reserved.
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.
To install OBO::Util::Set, copy and paste the appropriate command in to your terminal.
cpanm
cpanm OBO::Util::Set
CPAN shell
perl -MCPAN -e shell install OBO::Util::Set
For more information on module installation, please visit the detailed CPAN module installation guide.