Joachim Bargsten

NAME

Bio::Gonzales::Seq::Filter::ProteinCleaner - clean protein sequences

SYNOPSIS

    my $pc = Bio::Gonzales::Seq::Filter::ProteinCleaner->new(no_desc => 1, uncommon_aa => 1, terminal => 1);
    my $seqs = $pc->clean(@seqs)

DESCRIPTION

Remove or replace strings from protein sequences that usually confuse 3rd party software

METHODS

$seqs = $pc->clean(@seqs)

Clean the sequences @seqs. Works on the objects.

AUTHOR

jw bargsten, <joachim.bargsten at wur.nl>