gbrowse_netinstall.pl
gbrowse_netinstall.pl -b|--build_param_str BUILD_STRING [options]
options:
-h|--help Show this message -d|--dev Use the developement version of both GBrowse and bioperl from CVS --bioperl_dev Use the development version of BioPerl from git --gbrowse_dev Use the development version of GBrowse from SVN --build_param_str=<args> Use this string to set Makefile.PL parameters such as CONF or PREFIX for GBrowse installation --install_param_str=<args> Use this string to predefine 'make install' parameters such as CONF or PREFIX for GBrowse installation --wincvs WinCVS is present--allow cvs install on Windows NOTE: This will not work; GBrowse is in svn now, so this script will have to be updated --gbrowse_path Path to GBrowse tarball (will not download GBrowse); Assumes a resulting 'Generic-Genome-Browser' directory --bioperl_path Path to BioPerl tarball (will not download BioPerl); Assumes a resulting'bioperl-live' directory --skip_start Don't wait for 'Enter' at program start --skip_bioperl Don't fetch and install BioPerl; assumes a working bioperl is already installed
Net-based installer of GBrowse
Save this to disk as "gbrowse_netinstall.pl" and run:
[sudo] perl gbrowse_netinstall.pl
To install CGI::Toggle, copy and paste the appropriate command in to your terminal.
cpanm
cpanm CGI::Toggle
CPAN shell
perl -MCPAN -e shell install CGI::Toggle
For more information on module installation, please visit the detailed CPAN module installation guide.