NAME

Bio::Palantir::Parser::Location - BiosynML DTD-derived internal class

VERSION

version 0.191620

SYNOPSIS

    # TODO

DESCRIPTION

    # TODO

METHODS

dna_begin

Returns the genomic coordinates of the begin of the object used <dna_begin>.

    # $location is a Bio::FastParsers::Biosynml
    my $dna_begin = $location->dna_begin;

This method does not accept any arguments.

dna_end

Returns the genomic coordinates of the end of the object used dna_end>.

    # $location is a Bio::FastParsers::Biosynml
    my $dna_end = $location->dna_end;

This method does not accept any arguments.

dna_coordinates

Returns an arrayref of the dna_coordinates of the object used <dna_coordinates>.

    # $location is a Bio::FastParsers::Biosynml
    my $dna_coordinates = $location->dna_coordinates;

This method does not accept any arguments.

dna_size

Returns the difference between the begin and end coordinates of the object used <dna_size>.

    # $location is a Bio::FastParsers::Biosynml
    my $dna_size = $location->dna_size;

This method does not accept any arguments.

prot_begin

Returns the protein coordinates of the prot_begin of the object used <prot_begin>.

    # $location is a Bio::FastParsers::Biosynml
    my $prot_begin = $location->prot_begin;

This method does not accept any arguments.

prot_end

Returns the protein coordinates of the end of the object used <prot_end>.

    # $location is a Bio::FastParsers::Biosynml
    my $prot_end = $location->prot_end;

This method does not accept any arguments.

prot_coordinates

Returns an arrayref of the prot_coordinates of the object used <prot_coordinates>.

    # $location is a Bio::FastParsers::Biosynml
    my $prot_coordinates = $location->prot_coordinates;

This method does not accept any arguments.

prot_size

Returns the difference between the begin and end coordinates of the object used <prot_size>.

    # $location is a Bio::FastParsers::Biosynml
    my $prot_size = $location->prot_size;

This method does not accept any arguments.

AUTHOR

Loic MEUNIER <lmeunier@uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2019 by University of Liege / Unit of Eukaryotic Phylogenomics / Loic MEUNIER and Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.

cpanm Bio::Palantir

perl -MCPAN -e shell
install Bio::Palantir