Bio::Polloc - Perl library for Polymorphic Loci Analyses
Email lmrodriguezr at gmail dot com
Global variables controling the behavior of the package
The package's version
Verbosity level
Should I report the current Unix time on each debug line?
Should I save my work? Provided for testing purposes
Sets the file at which debug information should be saved if VERBOSITY is greater or equal to 2, and returns a Bio::Polloc::Polloc::IO object to write on it.
Methods provided by the package
Generic instantiation function
Gets/sets the verbosity level
-1 : No warnings 0 : Display warnings 1 : Display warnings with stacktrace 2 : + debug information 3 : + throw on warning
An integer (as the arguments)
Throws an Exception
The message of the error
The element causing the error
The exception class (Bio::Polloc::Polloc::Error by default)
Nothing
Appends debug information to the $Bio::Polloc::Polloc::DEBUGLOG or STDERR if verbosity is greater than 1
Launches a warning message. If verbosity is greater than two, the message becomes a throw.
throw
Attempts to display all the content of a given object
Some object (any type)
Nothing, the result is sent to STDOUT
Recursively removes a directory.
Methods intended to be used only witin the scope of Bio::Polloc::*
To install Bio::Polloc, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Polloc
CPAN shell
perl -MCPAN -e shell install Bio::Polloc
For more information on module installation, please visit the detailed CPAN module installation guide.