This method returns a Math::Symbolic tree representing a function which determines the temporal change of the concentration of the substrate passed as the argument. This function is determined by the reaction rates.
This method returns an array of Math::Symbolic trees. One for each substrate. The optional argument can be a Bio::Metabolic::Substrate::Cluster, an arrayref or an array of Bio::Metabolic::Substrate objects. If no argument is specified, it defaults to what the method substrates() returns.
Dumps a strong which can be used as an mfile for Matlab. The optional argument can be a Bio::Metabolic::Substrate::Cluster, an arrayref or an array of Bio::Metabolic::Substrate objects. If no argument is specified, it defaults to what the method substrates() returns.
The corresponding substrate concentrations are considered to be integration variables.
All parameters within the participating reactions must have a value. The method croaks if one parameter value is not defined.
To install Bio::Metabolic, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Metabolic
CPAN shell
perl -MCPAN -e shell install Bio::Metabolic
For more information on module installation, please visit the detailed CPAN module installation guide.