- AUTHOR - Jason Stajich
Bio::Tree::Statistics - Calculate certain statistics for a Tree
This should be where Tree statistics are calculated. It was previously where statistics from a Coalescent simulation. Currently it is empty because we have not added any Tree specific statistic calculations to this module yet. We welcome any contributions.
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
firstname.lastname@example.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
none so far
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : my $obj = new Bio::Tree::Statistics(); Function: Builds a new Bio::Tree::Statistics object Returns : Bio::Tree::Statistics Args :
Title : assess_bootstrap Usage : my $tree_with_bs = $stats->assess_bootstrap(\@bs_trees); Function: Calculates the bootstrap for internal nodes based on Returns : L<Bio::Tree::TreeI> Args : Arrayref of L<Bio::Tree::TreeI>s