Bio::SeqIO::MultiFile - Treating a set of files as a single input stream
$seqin = Bio::SeqIO::MultiFile( '-format' => 'Fasta', '-files' => ['file1','file2'] ); while((my $seq = $seqin->next_seq)) { # do something with $seq }
Bio::SeqIO::MultiFile provides a simple way of bundling a whole set of identically formatted sequence input files as a single stream.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : next_seq Usage : Function: Example : Returns : Args :
Title : next_primary_seq Usage : Function: Example : Returns : Args :
Title : _load_file Usage : Function: Example : Returns : Args :
Title : _set_file Usage : Function: Example : Returns : Args :
Title : _current_seqio Usage : $obj->_current_seqio($newval) Function: Example : Returns : value of _current_seqio Args : newvalue (optional)
Title : _format Usage : $obj->_format($newval) Function: Example : Returns : value of _format Args : newvalue (optional)
To install Bio::Seq, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Seq
CPAN shell
perl -MCPAN -e shell install Bio::Seq
For more information on module installation, please visit the detailed CPAN module installation guide.