Bio::Search::Hit::HitFactory - A factory to create Bio::Search::Hit::HitI objects
use Bio::Search::Hit::HitFactory; my $factory = new Bio::Search::Hit::HitFactory(); my $resultobj = $factory->create(@args);
This is a general way of hiding the object creation process so that we can dynamically change the objects that are created by the SearchIO parser depending on what format report we are parsing.
This object is for creating new Hits.
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new Usage : my $obj = new Bio::Search::Hit::HitFactory(); Function: Builds a new Bio::Search::Hit::HitFactory object Returns : Bio::Search::Hit::HitFactory Args :
Title : create Usage : $factory->create(%args) Function: Create a new L<Bio::Search::Hit::HitI> object Returns : L<Bio::Search::Hit::HitI> Args : hash of initialization parameters
Title : type Usage : $factory->type('Bio::Search::Hit::GenericHit'); Function: Get/Set the Hit creation type Returns : string Args : [optional] string to set
To install Bio::Seq, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Seq
CPAN shell
perl -MCPAN -e shell install Bio::Seq
For more information on module installation, please visit the detailed CPAN module installation guide.