Bio::Tradis::Parser::Cigar - Take in a cigar string and output start and end relative to the reference sequence
version 1.4.1
Take in a cigar string and output start and end relative to the reference sequence
use Bio::Tradis::Parser::Cigar; my $cigar = Bio::Tradis::Parser::Cigar->new(coordinate => 123, cigar => '10S90M'); $cigar->start; $cigar->end;
Carla Cummins <path-help@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::Tradis, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Tradis
CPAN shell
perl -MCPAN -e shell install Bio::Tradis
For more information on module installation, please visit the detailed CPAN module installation guide.