Bio::MAGETAB::Util::Reader::SDRF - SDRF parser class.
use Bio::MAGETAB::Util::Reader::SDRF; my $parser = Bio::MAGETAB::Util::Reader::SDRF->new({ uri => $sdrf_filename, }); my $sdrf = $parser->parse();
This class is used to parse SDRF files. It can be used on its own, but more often you will want to use the main Bio::MAGETAB::Util::Reader class which handles extended parsing options more transparently.
See the TabFile class for superclass attributes.
A Bio::MAGETAB::SDRF object. This can either be set upon instantiation, or a new object will be created for you. It can be retrieved at any time using get_magetab_object.
get_magetab_object
Parse the SDRF pointed to by $self->get_uri(). Returns the Bio::MAGETAB::SDRF object updated with the SDRF contents.
$self->get_uri()
Bio::MAGETAB::Util::Reader::Tabfile Bio::MAGETAB::Util::Reader Bio::MAGETAB::SDRF
Tim F. Rayner <tfrayner@gmail.com>
This library is released under version 2 of the GNU General Public License (GPL).
To install Bio::MAGETAB, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::MAGETAB
CPAN shell
perl -MCPAN -e shell install Bio::MAGETAB
For more information on module installation, please visit the detailed CPAN module installation guide.