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2 non-PAUSE users.

Thomas Sibley 🚲
and 1 contributors

NAME

recs-fromfasta

USAGE

    Usage: recs-fromfasta <args> [<files>]
       Each sequence from the FASTA input files (or stdin) produces an output record
       with the keys name and sequence. Each sequence name is also split into id and
       description on the first whitespace, if any.
    
    Arguments:
       --oneline                    Strip any newlines from the sequence so it is
                                    one long line
       --filename-key|fk <keyspec>  Add a key with the source filename (if no
                                    filename is applicable will put NONE)
    
      Help Options:
          --help  This help screen
    
    Examples:
       Parse a FASTA file into records, stripping newlines in the sequence
          recs-fromfasta --oneline < example.fasta

SEE ALSO

App::RecordStream::Bio