Bio::Biblio::IO::pubmedxml - A converter of XML files with PUBMED citations
Do not use this object directly, it is recommended to access it and use it through the Bio::Biblio::IO module:
use Bio::Biblio::IO; my $io = new Bio::Biblio::IO (-format => 'pubmedxml');
This object reads bibliographic citations in XML/MEDLINE format and converts them into Bio::Biblio::RefI objects. It is an implementation of methods defined in Bio::Biblio::IO.
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Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web:
bioperl-bugs@bioperl.org http://bugzilla.bioperl.org/
Martin Senger (senger@ebi.ac.uk)
Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved.
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
This software is provided "as is" without warranty of any kind.
The main documentation details are to be found in Bio::Biblio::IO.
Here is the rest of the object methods. Internal methods are preceded with an underscore _.
Usage : print $Bio::Biblio::IO::pubmedxml::VERSION; print $Bio::Biblio::IO::pubmedxml::Revision;
To install Bio::Seq, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Seq
CPAN shell
perl -MCPAN -e shell install Bio::Seq
For more information on module installation, please visit the detailed CPAN module installation guide.