Bio::Structure::Residue - Bioperl structure Object, describes a Residue
#add synopsis here
This object stores a Bio::Structure::Residue
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new() Usage : $residue = Bio::Structure::Residue->new( -id => 'human_id', ); Function: Returns a new Bio::Structure::Residue object from basic constructors. Probably most called from Bio::Structure::IO. Returns : a new Bio::Structure::Residue object
Title : atom Usage : Function: nothing usefull untill I get symbolic references to do what I want Returns : Args :
Title : add_atom Usage : Function: nothing usefull untill I get symbolic references to do what I want Returns : Args :
Title : chain Usage : $chain = $residue->chain($chain) Function: Sets the Chain this Residue belongs to Returns : Returns the Chain this Residue belongs to Args : reference to a Chain
Title : id Usage : $residue->id("TRP-35") Function: Gets/sets the ID for this residue Returns : the ID Args : the ID
Title : DESTROY Usage : Function: destructor ( get rid of circular references ) Returns : Args :
Title : _remove_atoms Usage : Function: Removes the atoms attached to a Residue. Tells the atoms they don't belong to this Residue any more Returns : Args :
Title : _remove_chain Usage : Function: Removes the Chain this Residue is atttached to. Returns : Args :
Title : _grandparent Usage : Function: get/set a symbolic reference to our grandparent Returns : Args :
To install Bio::Seq, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Seq
CPAN shell
perl -MCPAN -e shell install Bio::Seq
For more information on module installation, please visit the detailed CPAN module installation guide.