NAME

Bio::DB::DBI::Transaction - DESCRIPTION of Object

SYNOPSIS

Give standard usage here

DESCRIPTION

Describe the object here

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

  http://redmine.open-bio.org/projects/bioperl/

AUTHOR - Hilmar Lapp

Email hlapp at gmx.net

Describe contact details here

CONTRIBUTORS

Additional contributors names and emails here

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new

 Title   : new
 Usage   : 
 Function: This method throws an exception. Use get_Transaction() 
           to get a Transaction object.
 Returns : 
 Args    :

_new

 Title   : _new
 Usage   : my $obj = Bio::DB::DBI::Transaction->_new();
 Function: Builds a new Bio::DB::DBI::Transaction object 

           This is a private method. If you call this method from
           outside you are on your own. Call get_Transaction() to
           obtain an instance of this class.

 Returns : an instance of Bio::DB::DBI::Transaction
 Args    :

dbh

 Title   : dbh
 Usage   :
 Function: Get/set the database connection handle for this transaction.
           Transactions are connection-specific.

           You should not need to call this method from outside. If
           you do, call yourself bold, but you're on your own ...

 Example :
 Returns : A DBI database connection handle 
 Args    : on set, the new DBI database connection handle

commit

 Title   : commit
 Usage   :
 Function: Commit this transaction.

           Read the DBI perldoc for $dbh->commit about possible
           return values and behaviour.

           Committing the transaction will also notify all listeners
           before and after the actual commit. Listeners have the
           opportunity to veto a transaction commit by returning
           false from their before_commit() method.

 Example :
 Returns : The return value from $dbh->commit()
 Args    : none

rollback

 Title   : rollback
 Usage   :
 Function: Rollback this transaction.

           Read the DBI perldoc for $dbh->rollback about possible
           return values and behaviour.

           Rolling back the transaction will also notify all listeners
           before and after the actual rollback. Listeners cannot veto
           a transaction rollback.

 Example :
 Returns : The return value from $dbh->rollback()
 Args    : none

get_TransactionListeners

 Title   : get_TransactionListeners
 Usage   : @arr = get_TransactionListeners()
 Function: Get the list of TransactionListener(s) for this object.

           We currently do not enforce the listener objects to
           literally be Bio::DB::DBI::TransactionListener implementing
           objects. This object can handle this; use $obj->can() for
           every listener-specific call you invoke yourself on the
           returned objects.

 Example :
 Returns : An array of Bio::DB::DBI::TransactionListener objects
 Args    :

add_TransactionListener

 Title   : add_TransactionListener
 Usage   :
 Function: Add one or more TransactionListener(s) to this object.

           We currently do not enforce the listener objects to
           literally be Bio::DB::DBI::TransactionListener implementing
           objects.

 Example :
 Returns : 
 Args    : One or more Bio::DB::DBI::TransactionListener objects.

remove_TransactionListeners

 Title   : remove_TransactionListeners
 Usage   :
 Function: Remove all TransactionListeners for this class.

           We currently do not enforce the listener objects to
           literally be Bio::DB::DBI::TransactionListener implementing
           objects. This object can handle this; use $obj->can() for
           every listener-specific call you invoke yourself on the
           returned objects.

 Example :
 Returns : The list of previous TransactionListeners as an array of
           Bio::DB::DBI::TransactionListener objects.
 Args    :

remove_TransactionListener

 Title   : remove_TransactionListener
 Usage   :
 Function: Remove one TransactionListener for this class.

           We currently do not enforce the listener objects to
           literally be Bio::DB::DBI::TransactionListener implementing
           objects. This object can handle this; use $obj->can() for
           every listener-specific call you invoke yourself on the
           returned objects.

 Example :
 Returns : void
 Args    : A Bio::DB::DBI::TransactionListener object

get_Transaction

 Title   : get_Transaction
 Usage   :
 Function: Get the Transaction for a particular connection.

           This is a class method. 
 Example :
 Returns : an instance of this class
 Args    : a DBI database connection handle for which to obtain
           the transaction

           All other arguments are passed on to new() if a new
           Transaction needs to be created.

cpanm Bio::BioEntry

perl -MCPAN -e shell
install Bio::BioEntry