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AcePerl-1.75
River stage one • 1 direct dependent • 1 total dependent
++

Changes for version 1.75

  • 1. Fixed a bad bug involving inability to index into portions of the subtree anchored by numeric 0. 2. Added the -filled argument to autogenerated methods (big win). 3. Added -coordinates and -getcoordinates arguments to asGif() to support scrolling and zooming images.

Modules

Ace
Object-Oriented Access to ACEDB Databases
Ace::Browser::AceSubs
Subroutines for AceBrowser
Ace::Graphics::Fk
A dummy feature object used for generating panel key tracks
Ace::Graphics::Glyph
Base class for Ace::Graphics::Glyph objects
Ace::Graphics::Glyph::anchored_arrow
The "anchored_arrow" glyph
Ace::Graphics::Glyph::arrow
The "arrow" glyph
Ace::Graphics::Glyph::dot
The "ellipse" glyph
Ace::Graphics::Glyph::ex
The "X" glyph
Ace::Graphics::Glyph::group
The group glyph
Ace::Graphics::Glyph::line
The "line" glyph
Ace::Graphics::Glyph::primers
The "STS primers" glyph
Ace::Graphics::Glyph::segments
The "discontinuous segments" glyph
Ace::Graphics::Glyph::span
The "span" glyph
Ace::Graphics::Glyph::toomany
The "too many to show" glyph
Ace::Graphics::Glyph::transcript
The "gene" glyph
Ace::Graphics::Glyph::triangle
The "triangle" glyph
Ace::Graphics::GlyphFactory
Create Ace::Graphics::Glyphs
Ace::Graphics::Panel
PNG graphics of Ace::Sequence::Feature objects
Ace::Graphics::Track
PNG graphics of Ace::Sequence::Feature objects
Ace::Iterator
Iterate Across an ACEDB Query
Ace::Local
use giface, tace or gifaceclient to open a local connection to an Ace database
Ace::Model
Get information about AceDB models
Ace::Object
Manipulate Ace Data Objects
Ace::Sequence
Examine ACeDB Sequence Objects
Ace::Sequence::Feature
Examine Sequence Feature Tables
Ace::Sequence::FeatureList
Lightweight Access to Features
Ace::Sequence::GappedAlignment
Gapped alignment object
Ace::Sequence::Homol
Temporary Sequence Homology Class
Ace::Sequence::Multi
Combine Feature Tables from Multiple Databases
Ace::Sequence::Transcript
Simple "Gene" Object

Provides

Ace::Browser::GeneSubs
in Ace/Browser/GeneSubs.pm
Ace::Browser::SearchSubs
in Ace/Browser/SearchSubs.pm
Ace::Browser::SiteDefs
in Ace/Browser/SiteDefs.pm
Ace::Browser::TreeSubs
in Ace/Browser/TreeSubs.pm
Ace::Freesubs
in Freesubs/Freesubs.pm
Ace::Graphics::Glyph::crossbox
in Ace/Graphics/Glyph/crossbox.pm
Ace::Object::Wormbase
in Ace/Object/Wormbase.pm
Ace::RPC
in RPC/RPC.pm
Ace::SocketServer
in Ace/SocketServer.pm
GFF::Filehandle
in GFF/Filehandle.pm

Examples

Other files