FASTX-Reader

Andrea Telatin 🧬 /

FASTX-Reader-1.5.0-TRIAL

4 ++

++ed by:

4 non-PAUSE users

PROCH Andrea Telatin 🧬

and 1 contributors

Changes for version 1.5.0 - 2022-06-24

FASTX::Seq with undef name is now rendered as FASTA/Q with name "sequence"

Documentation

fqc

A FASTA/FASTQ sequence counter

fqlen.pl

A demo implementation to filter fastx files by length

Modules

FASTX::PE

A Paired-End FASTQ files reader, based on FASTX::Reader.

FASTX::Reader

A simple module to parse FASTA and FASTQ files, supporting compressed files and paired-ends.

FASTX::ScriptHelper

Shared routines for binaries using FASTX::Reader and FASTX::PE.

FASTX::Seq

A class for representing a sequence for FASTX::Reader

Other files

To install FASTX::Reader, copy and paste the appropriate command in to your terminal.

cpanm

cpanm FASTX::Reader

CPAN shell

perl -MCPAN -e shell
install FASTX::Reader

For more information on module installation, please visit the detailed CPAN module installation guide.

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Changes for version 1.5.0 - 2022-06-24

Documentation

Modules

Other files

Module Install Instructions