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Changes for version 1.3.0 - 2020-04-11

  • checking that the input files contains sequences
  • BUG FIX: Wrong auN returned if thousands separator was also enabled
  • 'n50' program now supports custom "Nx" (-e INT)

Documentation

n50
A script to calculate N50 from one or multiple FASTA/FASTQ files.

Modules

a small module to calculate N50 (total size, and total number of sequences) for a FASTA or FASTQ file. It's easy to install, with minimal dependencies.