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Documentation

script to sync the DBIx::Class object layer with the current set of chado tables

Modules

standard DBIx::Class layer for the Chado database schema

Provides

in lib/Bio/Chado/Schema/Companalysis/Analysis.pm
in lib/Bio/Chado/Schema/Companalysis/Analysisfeature.pm
in lib/Bio/Chado/Schema/Companalysis/Analysisprop.pm
in lib/Bio/Chado/Schema/Composite/AllFeatureNames.pm
in lib/Bio/Chado/Schema/Composite/Dfeatureloc.pm
in lib/Bio/Chado/Schema/Composite/FLoc.pm
in lib/Bio/Chado/Schema/Composite/FType.pm
in lib/Bio/Chado/Schema/Composite/FeatureContains.pm
in lib/Bio/Chado/Schema/Composite/FeatureDifference.pm
in lib/Bio/Chado/Schema/Composite/FeatureDisjoint.pm
in lib/Bio/Chado/Schema/Composite/FeatureDistance.pm
in lib/Bio/Chado/Schema/Composite/FeatureIntersection.pm
in lib/Bio/Chado/Schema/Composite/FeatureMeets.pm
in lib/Bio/Chado/Schema/Composite/FeatureMeetsOnSameStrand.pm
in lib/Bio/Chado/Schema/Composite/FeatureUnion.pm
in lib/Bio/Chado/Schema/Composite/FeaturesetMeets.pm
in lib/Bio/Chado/Schema/Composite/FnrType.pm
in lib/Bio/Chado/Schema/Composite/FpKey.pm
in lib/Bio/Chado/Schema/Composite/Gff3atts.pm
in lib/Bio/Chado/Schema/Composite/Gff3view.pm
in lib/Bio/Chado/Schema/Composite/Gffatts.pm
in lib/Bio/Chado/Schema/Contact/Contact.pm
in lib/Bio/Chado/Schema/Contact/ContactRelationship.pm
in lib/Bio/Chado/Schema/Cv/CommonAncestorCvterm.pm
in lib/Bio/Chado/Schema/Cv/CommonDescendantCvterm.pm
in lib/Bio/Chado/Schema/Cv/Cv.pm
in lib/Bio/Chado/Schema/Cv/CvCvtermCount.pm
in lib/Bio/Chado/Schema/Cv/CvCvtermCountWithObs.pm
in lib/Bio/Chado/Schema/Cv/CvLeaf.pm
in lib/Bio/Chado/Schema/Cv/CvLinkCount.pm
in lib/Bio/Chado/Schema/Cv/CvPathCount.pm
in lib/Bio/Chado/Schema/Cv/CvRoot.pm
in lib/Bio/Chado/Schema/Cv/Cvterm.pm
in lib/Bio/Chado/Schema/Cv/CvtermDbxref.pm
in lib/Bio/Chado/Schema/Cv/CvtermRelationship.pm
in lib/Bio/Chado/Schema/Cv/Cvtermpath.pm
in lib/Bio/Chado/Schema/Cv/Cvtermprop.pm
in lib/Bio/Chado/Schema/Cv/Cvtermsynonym.pm
in lib/Bio/Chado/Schema/Cv/Dbxrefprop.pm
in lib/Bio/Chado/Schema/Cv/StatsPathsToRoot.pm
in lib/Bio/Chado/Schema/Expression/Eimage.pm
in lib/Bio/Chado/Schema/Expression/Expression.pm
in lib/Bio/Chado/Schema/Expression/ExpressionCvterm.pm
in lib/Bio/Chado/Schema/Expression/ExpressionCvtermprop.pm
in lib/Bio/Chado/Schema/Expression/ExpressionImage.pm
in lib/Bio/Chado/Schema/Expression/ExpressionPub.pm
in lib/Bio/Chado/Schema/Expression/Expressionprop.pm
in lib/Bio/Chado/Schema/Expression/FeatureExpression.pm
in lib/Bio/Chado/Schema/Expression/FeatureExpressionprop.pm
in lib/Bio/Chado/Schema/General/Db.pm
in lib/Bio/Chado/Schema/General/DbDbxrefCount.pm
in lib/Bio/Chado/Schema/General/Dbxref.pm
in lib/Bio/Chado/Schema/General/Project.pm
in lib/Bio/Chado/Schema/General/Tableinfo.pm
in lib/Bio/Chado/Schema/Genetic/Environment.pm
in lib/Bio/Chado/Schema/Genetic/EnvironmentCvterm.pm
in lib/Bio/Chado/Schema/Genetic/FeatureGenotype.pm
in lib/Bio/Chado/Schema/Genetic/Genotype.pm
in lib/Bio/Chado/Schema/Genetic/Phendesc.pm
in lib/Bio/Chado/Schema/Genetic/PhenotypeComparison.pm
in lib/Bio/Chado/Schema/Genetic/PhenotypeComparisonCvterm.pm
in lib/Bio/Chado/Schema/Genetic/Phenstatement.pm
in lib/Bio/Chado/Schema/Library/Library.pm
in lib/Bio/Chado/Schema/Library/LibraryCvterm.pm
in lib/Bio/Chado/Schema/Library/LibraryDbxref.pm
in lib/Bio/Chado/Schema/Library/LibraryFeature.pm
in lib/Bio/Chado/Schema/Library/LibraryPub.pm
in lib/Bio/Chado/Schema/Library/LibrarySynonym.pm
in lib/Bio/Chado/Schema/Library/Libraryprop.pm
in lib/Bio/Chado/Schema/Library/LibrarypropPub.pm
in lib/Bio/Chado/Schema/Mage/Acquisition.pm
in lib/Bio/Chado/Schema/Mage/AcquisitionRelationship.pm
in lib/Bio/Chado/Schema/Mage/Acquisitionprop.pm
in lib/Bio/Chado/Schema/Mage/Arraydesign.pm
in lib/Bio/Chado/Schema/Mage/Arraydesignprop.pm
in lib/Bio/Chado/Schema/Mage/Assay.pm
in lib/Bio/Chado/Schema/Mage/AssayBiomaterial.pm
in lib/Bio/Chado/Schema/Mage/AssayProject.pm
in lib/Bio/Chado/Schema/Mage/Assayprop.pm
in lib/Bio/Chado/Schema/Mage/Biomaterial.pm
in lib/Bio/Chado/Schema/Mage/BiomaterialDbxref.pm
in lib/Bio/Chado/Schema/Mage/BiomaterialRelationship.pm
in lib/Bio/Chado/Schema/Mage/BiomaterialTreatment.pm
in lib/Bio/Chado/Schema/Mage/Biomaterialprop.pm
in lib/Bio/Chado/Schema/Mage/Channel.pm
in lib/Bio/Chado/Schema/Mage/Control.pm
in lib/Bio/Chado/Schema/Mage/Element.pm
in lib/Bio/Chado/Schema/Mage/ElementRelationship.pm
in lib/Bio/Chado/Schema/Mage/Elementresult.pm
in lib/Bio/Chado/Schema/Mage/ElementresultRelationship.pm
in lib/Bio/Chado/Schema/Mage/Magedocumentation.pm
in lib/Bio/Chado/Schema/Mage/Mageml.pm
in lib/Bio/Chado/Schema/Mage/Protocol.pm
in lib/Bio/Chado/Schema/Mage/Protocolparam.pm
in lib/Bio/Chado/Schema/Mage/Quantification.pm
in lib/Bio/Chado/Schema/Mage/QuantificationRelationship.pm
in lib/Bio/Chado/Schema/Mage/Quantificationprop.pm
in lib/Bio/Chado/Schema/Mage/Study.pm
in lib/Bio/Chado/Schema/Mage/StudyAssay.pm
in lib/Bio/Chado/Schema/Mage/Studydesign.pm
in lib/Bio/Chado/Schema/Mage/Studydesignprop.pm
in lib/Bio/Chado/Schema/Mage/Studyfactor.pm
in lib/Bio/Chado/Schema/Mage/Studyfactorvalue.pm
in lib/Bio/Chado/Schema/Mage/Studyprop.pm
in lib/Bio/Chado/Schema/Mage/StudypropFeature.pm
in lib/Bio/Chado/Schema/Mage/Treatment.pm
in lib/Bio/Chado/Schema/Map/Featuremap.pm
in lib/Bio/Chado/Schema/Map/FeaturemapPub.pm
in lib/Bio/Chado/Schema/Map/Featurepos.pm
in lib/Bio/Chado/Schema/Map/Featurerange.pm
in lib/Bio/Chado/Schema/Organism/Organism.pm
in lib/Bio/Chado/Schema/Organism/OrganismDbxref.pm
in lib/Bio/Chado/Schema/Organism/Organismprop.pm
in lib/Bio/Chado/Schema/Phenotype/FeaturePhenotype.pm
in lib/Bio/Chado/Schema/Phenotype/Phenotype.pm
in lib/Bio/Chado/Schema/Phenotype/PhenotypeCvterm.pm
in lib/Bio/Chado/Schema/Phylogeny/Phylonode.pm
in lib/Bio/Chado/Schema/Phylogeny/PhylonodeDbxref.pm
in lib/Bio/Chado/Schema/Phylogeny/PhylonodeOrganism.pm
in lib/Bio/Chado/Schema/Phylogeny/PhylonodePub.pm
in lib/Bio/Chado/Schema/Phylogeny/PhylonodeRelationship.pm
in lib/Bio/Chado/Schema/Phylogeny/Phylonodeprop.pm
in lib/Bio/Chado/Schema/Phylogeny/Phylotree.pm
in lib/Bio/Chado/Schema/Phylogeny/PhylotreePub.pm
in lib/Bio/Chado/Schema/Pub/Pub.pm
in lib/Bio/Chado/Schema/Pub/PubDbxref.pm
in lib/Bio/Chado/Schema/Pub/PubRelationship.pm
in lib/Bio/Chado/Schema/Pub/Pubauthor.pm
in lib/Bio/Chado/Schema/Pub/Pubprop.pm
in lib/Bio/Chado/Schema/Sequence/Cvtermsynonym.pm
in lib/Bio/Chado/Schema/Sequence/Feature.pm
in lib/Bio/Chado/Schema/Sequence/FeatureCvterm.pm
in lib/Bio/Chado/Schema/Sequence/FeatureCvtermDbxref.pm
in lib/Bio/Chado/Schema/Sequence/FeatureCvtermPub.pm
in lib/Bio/Chado/Schema/Sequence/FeatureCvtermprop.pm
in lib/Bio/Chado/Schema/Sequence/FeatureDbxref.pm
in lib/Bio/Chado/Schema/Sequence/FeaturePub.pm
in lib/Bio/Chado/Schema/Sequence/FeaturePubprop.pm
in lib/Bio/Chado/Schema/Sequence/FeatureRelationship.pm
in lib/Bio/Chado/Schema/Sequence/FeatureRelationshipPub.pm
in lib/Bio/Chado/Schema/Sequence/FeatureRelationshipprop.pm
in lib/Bio/Chado/Schema/Sequence/FeatureRelationshippropPub.pm
in lib/Bio/Chado/Schema/Sequence/FeatureSynonym.pm
in lib/Bio/Chado/Schema/Sequence/Featureloc.pm
in lib/Bio/Chado/Schema/Sequence/FeaturelocPub.pm
in lib/Bio/Chado/Schema/Sequence/Featureprop.pm
in lib/Bio/Chado/Schema/Sequence/FeaturepropPub.pm
in lib/Bio/Chado/Schema/Sequence/Synonym.pm
in lib/Bio/Chado/Schema/Sequence/TypeFeatureCount.pm
in lib/Bio/Chado/Schema/Stock/Stock.pm
in lib/Bio/Chado/Schema/Stock/StockCvterm.pm
in lib/Bio/Chado/Schema/Stock/StockDbxref.pm
in lib/Bio/Chado/Schema/Stock/StockGenotype.pm
in lib/Bio/Chado/Schema/Stock/StockPub.pm
in lib/Bio/Chado/Schema/Stock/StockRelationship.pm
in lib/Bio/Chado/Schema/Stock/StockRelationshipPub.pm
in lib/Bio/Chado/Schema/Stock/Stockcollection.pm
in lib/Bio/Chado/Schema/Stock/StockcollectionStock.pm
in lib/Bio/Chado/Schema/Stock/Stockcollectionprop.pm
in lib/Bio/Chado/Schema/Stock/Stockprop.pm
in lib/Bio/Chado/Schema/Stock/StockpropPub.pm