Changes for version 1.02

  • Version numbers added to PM files

Modules

Read SAM/BAM/CRAM database files
Add high-level methods to Bio::DB::HTS::Alignment
The HTS alignment object
Constants for use with SAM/BAM
Object passed to pileup() callback
Add high-level methods to Bio::DB::HTS::Pileup
Object representing the query portion of a BAM/SAM alignment
Object representing the query portion of a BAM/SAM alignment in NATIVE alignment

Provides

in lib/Bio/DB/HTS.pm
in lib/Bio/DB/HTS/FetchIterator.pm
in lib/Bio/DB/HTS/ReadIterator.pm
in lib/Bio/DB/HTS/Segment.pm
in lib/Bio/DB/HTS/Segment.pm
in lib/Bio/DB/HTS/AlignWrapper.pm
in lib/Bio/DB/HTS.pm
in lib/Bio/DB/HTS.pm