Bio-BPWrapper

Changes for version 1.12 - 2016-07-01

bioaln:
- Allow BLAST input in bioaln
biotree:
- make biotree -m more efficent by avoiding pair-wise OTU distances
- Add options: --label-selected-nodes --del-low-boot --mid-point --as-text
- change option --distance to --dist
Bio::BPWrapper::SeqManipulations:
- Added support for IUPAC codes
- Added support for multimple sequence files when performing restriction analyses
Correct and expand documentation, add PDF reference

Alignment manipulations based on BioPerl

SNP statistics based on BioPerl

Manipulation of FASTA sequences based on BioPerl

Tree manipulations based on BioPerl

command-line utilities for Bio::Perl

Functions for bioaln

Functions for biopop

Functions for bioseq

Functions for biotree

To install Bio::BPWrapper, copy and paste the appropriate command in to your terminal.

cpanm Bio::BPWrapper

perl -MCPAN -e shell
install Bio::BPWrapper

For more information on module installation, please visit the detailed CPAN module installation guide.

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