Scott Cain

Modules

Provides

Changes for version 0.3

  • Added documentation for the Chado constructor
  • Changed the class method so that it always returns 'Sequence', which is really the right thing for it to do: class only makes sense in the context of Bio::DB::GFF.
  • Added a -fulltext option for using full text searching in postgres 8.4 or better. See perldoc Bio::DB::Das::Chado and gmod_chado_fts_prep.pl for more info, as well as the web page on the GMOD wiki: http://gmod.org/wiki/Chado_Full_Text_Search
  • Added feature_summary and coverage_array methods to Chado.pm to support the feature summary functionality of GBrowse2; see the GMOD wiki page describing this feature: http://gmod.org/wiki/Chado_gbrowse_summary_view