Author image Bridget McInnes
and 1 contributors

Documentation

This program returns the ancestors of a given CUI based on the configuration file.
This program returns the minimum and maximum depth of a given CUI or term.
This program runs a dfs over a specified set of sources and relations in the UMLS.
This program finds the least common subsumer between two concepts.
This program finds the number of concepts closer to the first concept than the second.
This program finds the number of terms between in the shoretest path between the two concepts.
This program returns all possible paths from a given CUI to the root.
This program finds the shoretest path between two concepts.
This program finds the length of the shortest path between two concepts.
This program returns all the CUIs of a term.
This program returns all associated terms of a concept.
This program returns all of a concepts children.
This program returns a list of compounds in the UMLS.
This program returns the definition of a concept or a term.
This program returns a list of CUIs based on the configuration file.
This program returns the DUI of a CUI (if in MSH)
This program returns the extended definition of a concept or a term.
This program returns the information content of a concept or a term.
This program returns the intrinsic information content of a concept or a term.
This program returns all of a concepts parents.
This programs returns all CUIs of a given relation.
This program returns all of a concepts relations.
This program returns a concepts semantic group(s).
This program returns a concepts semantic relation(s) between two semantic types
This program returns the definition of a semantic type.
This program returns the name of a semantic type given its abbreviation.
This program returns a concepts semantic type(s).
This program returns the table names associated with a specified configuration file or all that have been created
This program removes the temporary table and associated files that are created based on the configuration file.

Modules

Perl interface to the Unified Medical Language System (UMLS)
provides the information about CUIs in the UMLS for the modules in the UMLS::Interface package.
provides the error handeling for the modules in the UMLS-Interface package.
provides the information content of the CUIs in the UMLS for the modules in the UMLS::Interface package.
provides the path information for the modules in the UMLS::Interface package.
provides the semantic type path information for the modules in the UMLS::Interface package.