Revision history for Bio-Trace-ABIF
0.01 2006-10-26/17:30
First version, released on an unsuspecting world.
0.02 2006-11-15/22:30
Added method to compute CRL (Contiguous Read Length).
A few bugs fixed in the documentation.
1.00 2007-02-16/12:30
- contiguous_read_length() has now mandatory arguments. Trimming the
ends is now optional.
- Added methods to read all the ab1 file tags specified by the ABIF
format, including fsa tags.
- Added method write_tag() to overwrite existing data.
- Methods returning a scalar now return 'undef' in case of error
(e.g., tags not found).
- Signed shorts and longs are correctly unpacked.
- Methods sorted alphabetically.
- Fixed a version mismatch.
- Fized a bug in sample_score() occasionally causing division by zero.
Also, sample_score() in some cases returned negative values: this has
been fixed, too.
- Changed the semantics of clear_range_start() and clear_range_stop():
both methods return -1 if no clear range exists.
- Fixed bugs in clear_range_start() and clear_range_stop() that would
cause an error in some (very unfortunate) cases.
- Added clear_range() method, which returns an interval (start, stop).
- Much faster conversion from binary to floats.
- Fixed a bug in analysis_protocol_xml()