River stage two
• 3 direct dependents
• 10 total dependents
Bio-DB-NCBIHelper-1.7.8 A collection of routines useful for queries to NCBI databases.
15 Dec 2023 04:25:18 UTC
River stage zero
No dependents
Mashtree-1.4.6 functions for Mashtree databasing
03 Nov 2023 14:03:17 UTC
River stage zero
No dependents
Bio-EUtilities-1.77 BioPerl low-level API for retrieving and storing data from NCBI eUtils
09 Mar 2020 18:59:57 UTC
River stage one
• 2 direct dependents
• 2 total dependents
Bio-DB-GFF-1.7.4 Storage and retrieval of sequence annotation data
08 Jan 2020 20:41:58 UTC
River stage two
• 1 direct dependent
• 14 total dependents
Bio-Variation-1.7.5 BioPerl variation-related functionality
06 Jan 2020 19:59:16 UTC
River stage zero
No dependents
Bio-Tradis-1.4.5 Bio-Tradis contains a set of tools to analyse the output from TraDIS analyses. For more information on the TraDIS method, see http://genome.cshlp.org/content/19/12/2308
04 Dec 2019 14:41:26 UTC
River stage one
• 6 direct dependents
• 7 total dependents
Bio-Procedural-1.7.4 Simple low-dependency procedural interfaces to BioPerl
29 Nov 2019 20:57:49 UTC
River stage zero
No dependents
Bio-Roary-3.13.0 Create a pan genome
06 Nov 2019 21:32:21 UTC
River stage zero
No dependents
Bio-AutomatedAnnotation-1.182770 Automated annotation of assemblies
04 Oct 2018 13:47:56 UTC
River stage one
• 1 direct dependent
• 8 total dependents
Bio-Tools-Run-RemoteBlast-1.7.3 Object for remote execution of the NCBI Blast via HTTP
25 Sep 2018 04:48:13 UTC
River stage two
• 2 direct dependents
• 12 total dependents
Bio-ASN1-EntrezGene-1.73 Regular expression-based Perl Parser for NCBI Entrez Gene.
25 Sep 2018 02:32:11 UTC
River stage zero
No dependents
Bio-SeqIO-excel-1.7.3 sequence input/output stream from a MSExcel-formatted table
25 Sep 2018 01:30:22 UTC
River stage zero
No dependents
Bio-Draw-Pictogram-1.7.3 generate SVG output of Pictogram display for consensus motifs
25 Sep 2018 01:19:29 UTC
River stage zero
No dependents
Bio-NeXMLIO-1.7.3 stream handler for NeXML documents
11 Sep 2018 18:47:25 UTC
River stage zero
No dependents
Bio-Tools-Run-Alignment-Clustalw-1.7.4 Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the Clustalw program
11 Jul 2018 14:57:04 UTC
River stage zero
No dependents
Bio-Tools-Run-Alignment-TCoffee-1.7.4 Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the TCoffee program
09 Jul 2018 18:31:30 UTC
River stage one
• 1 direct dependent
• 1 total dependent
Bio-Tools-Phylo-PAML-1.7.3 Parses output from the PAML programs codeml, baseml, basemlg, codemlsites and yn00
01 Jul 2018 12:36:38 UTC
River stage zero
No dependents
PrimerView-1.3.0.1 batch and single primer sequence maps
09 Jul 2017 17:48:17 UTC
River stage zero
No dependents
Bio-MLST-Check-2.1.1706216 Multilocus sequence type checking using blast
03 Mar 2017 16:23:59 UTC
River stage zero
No dependents
Bio_AssemblyImprovement-1.160490 Improve an assembly by scaffolding, contig ordering and gap closing.
18 Feb 2016 10:10:42 UTC
River stage zero
No dependents
Bio-FeatureIO-1.6.905 Modules for reading, writing, and manipulating sequence features
05 Sep 2014 17:34:58 UTC
River stage one
• 1 direct dependent
• 1 total dependent
Bio-BLAST-0.4 low-level routines for working with BLAST tools and formats
12 Sep 2011 15:47:19 UTC
River stage zero
No dependents
Polloc-1.5.3b Polymorphic Loci analysis
29 Jun 2011 02:32:21 UTC
River stage one
• 1 direct dependent
• 1 total dependent
Catalyst-View-Bio-SeqIO-0.02 use BioPerl's Bio::SeqIO as a Catalyst view
21 Feb 2011 06:44:36 UTC
River stage zero
No dependents
Bio-Tools-CodonOptTable-1.05 A more elaborative way to check the codons usage!
16 Sep 2010 01:15:35 UTC
River stage zero
No dependents
PerlIO-via-SeqIO-0.0322 PerlIO layer for biological sequence formats
05 Dec 2009 20:28:53 UTC
River stage zero
No dependents
Bio-Grep-v0.10.6 Perl extension for searching in DNA and Protein sequences
12 Nov 2009 20:01:33 UTC
River stage zero
No dependents
Seeder-0.01 Motif discovery in DNA sequences
14 May 2008 23:05:07 UTC
River stage zero
No dependents
AlignAid-v0.0.2 easily run sequence alignments locally or on a cluster
16 Dec 2006 01:04:35 UTC