This is a *package* module that encapsulates a number of classes in the Bio::MAGE hierarchy. These classes belong to the DesignElement package of the MAGE-OM object model....

From the MAGE-OM documentation for the "Fiducial" class: A marking on the surface of the array that can be used to identify the array's origin, the coordinates of which are the fiducial's centroid....

From the MAGE-OM documentation for the "Image" class: An image is created by an imageAcquisition event, typically by scanning the hybridized array (the PhysicalBioAssay)....

This is a *package* module that encapsulates a number of classes in the Bio::MAGE hierarchy. These classes belong to the QuantitationType package of the MAGE-OM object model....

This is a *package* module that encapsulates a number of classes in the Bio::MAGE hierarchy. These classes belong to the AuditAndSecurity package of the MAGE-OM object model....

From the MAGE-OM documentation for the "ZoneDefect" class: Stores the defect information for a zone....

From the MAGE-OM documentation for the "Channel" class: A channel represents an independent acquisition scheme for the ImageAcquisition event, typically a wavelength....

From the MAGE-OM documentation for the "Zone" class: Specifies the location of a zone on an array....

From the MAGE-OM documentation for the "Unit" class: The unit is a strict enumeration of types. Bio::MAGE::Measurement::Unit is an abstract base class and should not be directly instanciated. Instead it serves as an interface definition for its subcl...

From the MAGE-OM documentation for the "ArrayGroup" class: An array package is a physical platform that contains one or more arrays that are separately addressable (e.g. several arrays that can be hybridized on a single microscope slide) or a virtual...

From the MAGE-OM documentation for the "Protocol" class: A Protocol is a parameterizable description of a method. ProtocolApplication is used to specify the ParameterValues of it's Protocol's Parameters....

From the MAGE-OM documentation for the "BioAssay" class: An abstract class which represents both physical and computational groupings of arrays and biomaterials. Bio::MAGE::BioAssay::BioAssay is an abstract base class and should not be directly insta...

From the MAGE-OM documentation for the "BioEvent" class: An abstract class to capture the concept of an event (either in the laboratory or a computational analysis). Bio::MAGE::BioEvent::BioEvent is an abstract base class and should not be directly i...

From the MAGE-OM documentation for the "Hardware" class: Hardware represents the hardware used. Examples of Hardware include: computers, scanners, wash stations etc......

From the MAGE-OM documentation for the "Software" class: Software represents the software used. Examples of Software include: feature extraction software, clustering software, etc......

From the MAGE-OM documentation for the "Parameter" class: A Parameter is a replaceable value in a Parameterizable class. Examples of Parameters include: scanning wavelength, laser power, centrifuge speed, multiplicative errors, the number of input no...

This is a *package* module that encapsulates a number of classes in the Bio::MAGE hierarchy. These classes belong to the HigherLevelAnalysis package of the MAGE-OM object model....

From the MAGE-OM documentation for the "FeatureDefect" class: Stores the defect information for a feature....

From the MAGE-OM documentation for the "PositionDelta" class: The delta the feature was actually printed on the array from the position specified for the feature in the array design....

From the MAGE-OM documentation for the "Database" class: An address to a repository....