ABI - Perl module to parse chromatogram files generated by Applied Biosystems (ABI) automated DNA sequencing machine. ++

An ABI chromatogram file is in binary format. It contain several information only some of which is required for normal use. This module only gives access to the most used information stored in ABI file. All the accesses are read only. If you have edi...

MALAY/ABI-1.0 - 20 Nov 2006 03:30:47 GMT - Search in distribution

Bio::SeqIO::abi - abi trace sequence input/output stream 11 ++

This object can transform Bio::Seq objects to and from abi trace files. To optionally read the trace graph data (which can be used to draw chromatographs, for instance), set the optional '-get_trace_data' flag or the get_trace_data method to a value ...

CJFIELDS/BioPerl-1.6.924 - 10 Jul 2014 20:22:23 GMT - Search in distribution

FAST::Bio::SeqIO::abi - abi trace sequence input/output stream ++

This object can transform FAST::Bio::Seq objects to and from abi trace files. To optionally read the trace graph data (which can be used to draw chromatographs, for instance), set the optional '-get_trace_data' flag or the get_trace_data method to a ...

DHARD/FAST-1.03 - 12 Feb 2015 19:02:27 GMT - Search in distribution

Mecom - A Perl module for protein contact interfaces evolutive analysis ++

This module integrates a workflow aimed to address the evolvability of the contact interfaces within a protein complex. The method "Mecom->run" launchs the whole analysis. Also, such workflow is divided into the following steps: Step 1, Structural an...

HVALVERDE/Mecom-1.15 - 13 Jul 2013 18:55:01 GMT - Search in distribution

libev - a high performance full-featured event loop written in C 18 ++
MLEHMANN/EV-4.18   (4 reviews) - 06 Sep 2014 18:43:03 GMT - Search in distribution

Urlader - installer-less single-file independent executables 2 ++

Urlader (that's german for "bootloader" btw.) was created out of frustration over PAR always being horribly slow, again not working, again not being flexible enough for simple things such as software upgrades, and again causing mysterious missing fil...

MLEHMANN/Urlader-1.01 - 17 Jun 2012 13:12:07 GMT - Search in distribution

Champlain - Map rendering canvas ++

Champlain consists of the Perl bindings for the C library libchamplain which provides a canvas widget based on Clutter that displays maps from various free map sources such as *OpenStreetMap*, *OpenAerialMap* and *Maps for free*. For more information...

POTYL/Champlain-0.12 - 23 May 2010 18:52:10 GMT - Search in distribution

perlfaq7 - General Perl Language Issues 1 ++

This section deals with general Perl language issues that don't clearly fit into any of the other sections. Can I get a BNF/yacc/RE for the Perl language? There is no BNF, but you can paw your way through the yacc grammar in perly.y in the source dis...

ETHER/perlfaq-5.021009 - 25 Jan 2015 22:36:45 GMT - Search in distribution

Sys::Hwloc - Perl Access to Portable Hardware Locality (hwloc) ++

The Sys::Hwloc module provides a Perl wrapper API around the Portable Hardware Locality (hwloc) C API. Visit <http://www.open-mpi.org/projects/hwloc> for information about hwloc. The module provides access to the functions of the hwloc API as well as...

BKA/Sys-Hwloc-0.10 - 20 Jan 2011 08:15:30 GMT - Search in distribution

FFI::Platypus - Write Perl bindings to non-Perl libraries with FFI. No XS required. 12 ++

Platypus is a library for creating interfaces to machine code libraries written in languages like C, C++, Fortran, Rust, Pascal. Essentially anything that gets compiled into machine code. This implementation uses "libffi" to accomplish this task. "li...

PLICEASE/FFI-Platypus-0.33 - 24 Mar 2015 01:56:41 GMT - Search in distribution

Search::Xapian - Perl XS frontend to the Xapian C++ search library. 2 ++

This module wraps most methods of most Xapian classes. The missing classes and methods should be added in the future. It also provides a simplified, more 'perlish' interface to some common operations, as demonstrated above. There are some gaps in the...

OLLY/Search-Xapian-   (4 reviews) - 21 Oct 2014 21:20:37 GMT - Search in distribution

Bio::Trace::ABIF - Perl extension for reading and parsing ABIF (Applied Biosystems, Inc. Format) files ++
VITA/Bio-Trace-ABIF-1.05 - 25 Feb 2010 13:14:10 GMT - Search in distribution

Bio::Align::Subset - A BioPerl module to generate new alignments as subset from larger alignments ++

Given an array of codon positions and an alignment, the function Bio::Align::Subset->build_subset returns a new alignment with the codons at those positions from the original alignment. CONSTRUCTOR Bio::Align::Subset->new() $Obj = Bio::Align::Subset-...

HVALVERDE/Bio-Align-Subset-1.27 - 08 May 2013 17:33:42 GMT - Search in distribution

Sys::Virt::Domain - Represent & manage a libvirt guest domain 7 ++

The "Sys::Virt::Domain" module represents a guest domain managed by the virtual machine monitor. METHODS my $id = $dom->get_id() Returns an integer with a locally unique identifier for the domain. my $uuid = $dom->get_uuid() Returns a 16 byte long st...

DANBERR/Sys-Virt-1.2.13 - 06 Mar 2015 10:48:17 GMT - Search in distribution

FFI::Platypus::Lang::CPP::Demangle::XS - Demangle C++ symbols using the C++ ABI API ++

This module provides an interface for demangling C++ symbols. It is an alternative to "c++filt" for FFI::Platyus::Lang::CPP. Perl 5.8.1 or newer is required. FUNCTIONS demangle my $demangled = demangle($c_symbol); Demangle the given symbol. If the in...

PLICEASE/FFI-Platypus-Lang-CPP-Demangle-XS-0.02 - 02 Feb 2015 05:01:11 GMT - Search in distribution

IO::Pty::HalfDuplex::PTrace - identify reads using syscall tracing ++
SOREAR/IO-Pty-HalfDuplex-0.02 - 18 Jun 2009 03:19:09 GMT - Search in distribution

lib/Memcached/libmemcached/memcached_create.pm 3 ++

memcached_create() is used to create a "memcached_st" structure that will then be used by other libmemcached(3) functions to communicate with the server. You should either pass a statically declared "memcached_st" to memcached_create() or a NULL. If ...

WOLFSAGE/Memcached-libmemcached-1.001702 - 14 Mar 2014 14:32:01 GMT - Search in distribution

Bio::Graphics::Glyph::trace - A glyph that visualizes a trace file ++

This glyph parses and displays trace information from a file. A generic glyph is used to show where the trace is located and when the display is zoomed in enough to see the sequence, the trace will be drawn. The trace file can only be in SCF format. ...

LDS/Bio-Graphics-2.39 - 31 Jul 2014 02:32:25 GMT - Search in distribution

HTML::Template::Compiled::Formatter - HTC subclass for using a formatter 3 ++
TINITA/HTML-Template-Compiled-1.001   (5 reviews) - 04 May 2013 11:02:23 GMT - Search in distribution