ABI - Perl module to parse chromatogram files generated by Applied Biosystems (ABI) automated DNA sequencing machine.

An ABI chromatogram file is in binary format. It contain several information only some of which is required for normal use. This module only gives access to the most used information stored in ABI file. All the accesses are read only. If you have edi...

MALAY/ABI-1.0 - 20 Nov 2006 03:30:47 GMT - Search in distribution

Bio::SeqIO::abi - abi trace sequence input/output stream

This object can transform Bio::Seq objects to and from abi trace files. To optionally read the trace graph data (which can be used to draw chromatographs, for instance), set the optional '-get_trace_data' flag or the get_trace_data method to a value ...

CJFIELDS/BioPerl-1.007001 - 06 Nov 2016 04:02:23 GMT - Search in distribution

FAST::Bio::SeqIO::abi - abi trace sequence input/output stream

This object can transform FAST::Bio::Seq objects to and from abi trace files. To optionally read the trace graph data (which can be used to draw chromatographs, for instance), set the optional '-get_trace_data' flag or the get_trace_data method to a ...

DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 GMT - Search in distribution

libev - a high performance full-featured event loop written in C

MLEHMANN/EV-4.22 - 20 Dec 2015 01:35:40 GMT - Search in distribution

perlepigraphs - list of Perl release epigraphs

Many Perl release announcements included an *epigraph*, a short excerpt from a literary or other creative work, chosen by the pumpking or release manager. This file assembles the known list of epigraph for posterity, and also links to the release ann...

XSAWYERX/perl-5.26.0 - 30 May 2017 19:41:19 GMT - Search in distribution

perlfaq7 - General Perl Language Issues

This section deals with general Perl language issues that don't clearly fit into any of the other sections. Can I get a BNF/yacc/RE for the Perl language? There is no BNF, but you can paw your way through the yacc grammar in perly.y in the source dis...

LLAP/perlfaq-5.021011 - 04 Mar 2016 20:04:35 GMT - Search in distribution

Urlader - installer-less single-file independent executables

Urlader (that's german for "bootloader" btw.) was created out of frustration over PAR always being horribly slow, again not working, again not being flexible enough for simple things such as software upgrades, and again causing mysterious missing fil...

MLEHMANN/Urlader-1.01 - 17 Jun 2012 13:12:07 GMT - Search in distribution

Mecom - A Perl module for protein contact interfaces evolutive analysis

This module integrates a workflow aimed to address the evolvability of the contact interfaces within a protein complex. The method "Mecom->run" launchs the whole analysis. Also, such workflow is divided into the following steps: Step 1, Structural an...

HVALVERDE/Mecom-1.15 - 13 Jul 2013 18:55:01 GMT - Search in distribution

Sys::Hwloc - Perl Access to Portable Hardware Locality (hwloc)

The Sys::Hwloc module provides a Perl wrapper API around the Portable Hardware Locality (hwloc) C API. Visit <http://www.open-mpi.org/projects/hwloc> for information about hwloc. The module provides access to the functions of the hwloc API as well as...

BKA/Sys-Hwloc-0.10 - 20 Jan 2011 08:15:30 GMT - Search in distribution

Bio::Trace::ABIF - Perl extension for reading and parsing ABIF (Applied Biosystems, Inc. Format) files

VITA/Bio-Trace-ABIF-1.06 - 02 Nov 2016 11:16:32 GMT - Search in distribution

Sys::Virt::Domain - Represent & manage a libvirt guest domain

The "Sys::Virt::Domain" module represents a guest domain managed by the virtual machine monitor....

DANBERR/Sys-Virt-3.5.0 - 06 Jul 2017 16:00:20 GMT - Search in distribution

Champlain - Map rendering canvas

Champlain consists of the Perl bindings for the C library libchamplain which provides a canvas widget based on Clutter that displays maps from various free map sources such as *OpenStreetMap*, *OpenAerialMap* and *Maps for free*. For more information...

POTYL/Champlain-0.12 - 23 May 2010 18:52:10 GMT - Search in distribution

FFI::Platypus - Write Perl bindings to non-Perl libraries with FFI. No XS required.

Platypus is a library for creating interfaces to machine code libraries written in languages like C, C++, Fortran, Rust, Pascal. Essentially anything that gets compiled into machine code. This implementation uses "libffi" to accomplish this task. "li...

PLICEASE/FFI-Platypus-0.47 - 23 Mar 2017 22:28:15 GMT - Search in distribution

Clownfish - Apache Clownfish symbiotic object system

The Apache Clownfish “symbiotic” object system pairs with “host” programming language environments and facilitates the development of high performance language extensions. Features * Support for multiple host languages. * Support for stand-alone C li...

NWELLNHOF/Clownfish-0.6.1 - 13 Dec 2016 13:37:50 GMT - Search in distribution

Search::Xapian - Perl XS frontend to the Xapian C++ search library.

This module wraps most methods of most Xapian classes. The missing classes and methods should be added in the future. It also provides a simplified, more 'perlish' interface to some common operations, as demonstrated above. There are some gaps in the...

OLLY/Search-Xapian- - 27 Sep 2016 06:15:10 GMT - Search in distribution

Linux::Seccomp - Interface to libseccomp Linux syscall filtering library

Secure Computing (seccomp) is Linux's system call filtering mechanism. This system can operate in two modes: *strict*, where only a very small number of system calls are allowed and the more modern *filter* (or seccomp mode 2) which permits advanced ...

MGV/Linux-Seccomp-0.002001 - 25 Nov 2016 16:10:51 GMT - Search in distribution

Alien::Role::Dino - Experimental support for dynamic share Alien install

Every now and then someone will ask me why thus and such Alien thing doesn't work with a dynamic library error. My usual response is can you make it work with static libraries? The reason for this is that building dynamic libraries for an Alien share...

PLICEASE/Alien-Role-Dino-0.05 - 17 Aug 2017 20:55:12 GMT - Search in distribution

Bio::Align::Subset - A BioPerl module to generate new alignments as subset from larger alignments

Given an array of codon positions and an alignment, the function Bio::Align::Subset->build_subset returns a new alignment with the codons at those positions from the original alignment....

HVALVERDE/Bio-Align-Subset-1.27 - 08 May 2013 17:33:42 GMT - Search in distribution

Bio::Graphics::Glyph::trace - A glyph that visualizes a trace file

This glyph parses and displays trace information from a file. A generic glyph is used to show where the trace is located and when the display is zoomed in enough to see the sequence, the trace will be drawn. The trace file can only be in SCF format. ...

CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 GMT - Search in distribution


ZMUGHAL/Image-Leptonica-0.04 - 16 Aug 2014 08:10:38 GMT - Search in distribution

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